PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Phylogenetic Tree for
Brassica rapa
MIKC_MADS Family
Phylogenetic tree for domain ? help Back to Top

      /------------------------------------------------------------------- XP_009110147.1/9-58   (1)
      |                                                                               
      |------------------------------------------------------------------- XP_009103260.1/9-58   (75)
      |                                                                               
      |                                                           /------- XP_009130488.1/9-56   (2)
      |                                                           |                   
      |                                                     /--83-+------- XP_009150582.1/9-56   (26)
      |                                                     |     |                   
      |                                              /--66--+     \------- XP_009130489.1/9-56   (41)
      |                                              |      |                         
      |                                       /--84--+      \------------- XP_009150584.1/9-56   (30)
      |                                       |      |                                
      |                                       |      \-------------------- XP_009130486.1/9-56   (52)
      |                                       |                                       
      |                                       |--------------------------- XP_009132707.1/9-59   (13)
      |            /------------100-----------+                                       
      |            |                          |--------------------------- XP_009125323.1/9-58   (17)
      |            |                          |                                       
      |            |                          |--------------------------- XP_009122081.1/9-59   (39)
      |            |                          |                                       
      |            |                          \--------------------------- XP_009131145.1/9-58   (49)
      |            |                                                                  
      |            |                                              /------- XP_009104172.1/24-73  (3)
      |            |                                        /--67-+                   
      |            |                                        |     \------- XP_009138935.1/24-73  (20)
      |            |                                        |                         
      |            |                                 /--81--+------------- XP_009116562.1/24-74  (9)
      |            |                                 |      |                         
      |            |                                 |      \------------- XP_009142866.1/24-73  (69)
      |            |                          /--83--+                                
      |            |                          |      |            /------- XP_009113581.1/10-59  (36)
      |            |                          |      \-----95-----+                   
      |            |------------94------------+                   \------- XP_009134170.1/9-57   (80)
      |            |                          |                                       
      |            |                          |                   /------- XP_009132356.1/25-75  (37)
      |            |                          \---------82--------+                   
      |            |                                              \------- XP_009136975.1/63-113 (50)
      |            |                                                                  
      |            |                                              /------- XP_009120826.1/9-58   (4)
      |            |                                              |                   
      |            |----------------------100---------------------+------- XP_009126431.1/9-58   (22)
      |            |                                              |                   
      |            |                                              \------- XP_009131786.1/9-58   (66)
      |            |                                                                  
      |            |                                              /------- XP_009107059.1/9-59   (5)
      |            |                          /---------64--------+                   
      |            |                          |                   \------- XP_009132582.1/9-59   (55)
      |            |                          |                                       
      |            |                          |                   /------- XP_009136477.1/9-59   (53)
      |            |                    /--99-+             /--95-+                   
      |            |                    |     |             |     \------- XP_009130170.1/19-69  (70)
      |            |                    |     |      /--55--+                         
      |            |                    |     |      |      \------------- XP_009109211.1/9-59   (57)
      |            |             /--72--+     \--87--+                                
      |            |             |      |            \-------------------- XP_009139222.1/9-59   (61)
      |            |             |      |                                             
      |            |      /--99--+      \--------------------------------- XP_009107033.1/47-97  (77)
      |            |      |      |                                                    
      |            |      |      \---------------------------------------- XP_009132580.1/11-61  (6)
      |            |--91--+                                                           
      |            |      |                                       /------- XP_009130198.1/9-59   (10)
      |            |      \-------------------99------------------+                   
      |            |                                              \------- XP_009112008.1/9-59   (45)
      |            |                                                                  
      |            |                                              /------- XP_009105460.1/9-59   (7)
      |            |                                              |                   
      |            |                                              |------- XP_009127703.1/9-59   (54)
      |            |                                        /--93-+                   
      +            |                                        |     |------- XP_009105010.1/9-59   (78)
      |            |                                        |     |                   
      |            |                                        |     \------- XP_009109914.1/9-59   (85)
      |            |                                 /--61--+                         
      |            |                                 |      |------------- XP_009136412.1/9-59   (46)
      |            |                                 |      |                         
      |            |                                 |      \------------- XP_009111964.1/9-59   (82)
      |            |                                 |                                
      |            |                                 |            /------- XP_009111804.1/10-58  (33)
      |            |----------------64---------------+            |                   
      |            |                                 |-----97-----+------- XP_009151758.1/13-61  (38)
      |            |                                 |            |                   
      |            |                                 |            \------- XP_009129675.1/10-58  (64)
      |            |                                 |                                
      |            |                                 \-------------------- XP_009130138.1/9-59   (88)
      |            |                                                                  
      |            |                                              /------- XP_009105505.1/13-53  (8)
      |            |                                              |                   
      |            |                                              |------- XP_009139036.1/16-66  (60)
      |            |                                              |                   
      |            |----------------------79----------------------+------- XP_009116442.1/20-70  (67)
      |            |                                              |                   
      |            |                                              |------- XP_009147629.1/9-59   (73)
      |            |                                              |                   
      |            |                                              \------- XP_009104054.1/9-59   (87)
      |            |                                                                  
      |      /-100-+                                              /------- XP_009133734.1/18-68  (11)
      |      |     |                                              |                   
      |      |     |                                 /-----97-----+------- XP_009142352.1/9-59   (14)
      |      |     |                                 |            |                   
      |      |     |                                 |            \------- XP_009143158.1/9-59   (86)
      |      |     |                                 |                                
      |      |     |                                 |-------------------- XP_009114655.1/9-59   (21)
      |      |     |----------------70---------------+                                
      |      |     |                                 |            /------- XP_009108594.1/9-59   (35)
      |      |     |                                 |      /--68-+                   
      |      |     |                                 |      |     \------- XP_009136496.1/9-59   (84)
      |      |     |                                 \--68--+                         
      |      |     |                                        \------------- XP_009137303.1/9-59   (89)
      |      |     |                                                                  
      |      |     |------------------------------------------------------ XP_009138791.1/9-59   (12)
      |      |     |                                                                  
      |      |     |                                              /------- XP_009117898.1/9-59   (15)
      |      |     |                                        /--99-+                   
      |      |     |                                        |     \------- XP_009147359.1/9-59   (42)
      |      |     |                                        |                         
      |      |     |                                        |------------- XP_009121545.1/9-59   (24)
      |      |     |                                        |                         
      |      |     |                                        |     /------- XP_009152152.1/9-59   (29)
      |      |     |                                        |--93-+                   
      |      |     |                                 /--57--+     \------- XP_009129078.1/9-59   (83)
      |      |     |                                 |      |                         
      |      |     |                                 |      |------------- XP_009131500.1/9-59   (34)
      |      |     |                                 |      |                         
      |      |     |----------------98---------------+      |------------- XP_009102994.1/9-59   (44)
      |      |     |                                 |      |                         
      |      |     |                                 |      \------------- XP_009109825.1/9-59   (76)
      |      |     |                                 |                                
      |      |     |                                 \-------------------- XP_009113782.1/9-59   (81)
      |      |     |                                                                  
      |      |     |                                              /------- XP_009139246.1/9-59   (16)
      |      |     |----------------------100---------------------+                   
      |      |     |                                              \------- XP_009116122.1/9-59   (62)
      |      |     |                                                                  
      |      |     |                                              /------- XP_009127862.1/9-57   (18)
      |      |     |                                        /--78-+                   
      |      |     |                                        |     \------- XP_009105825.1/9-57   (72)
      \--52--+     |-------------------100------------------+                         
             |     |                                        \------------- XP_009104908.1/9-57   (43)
             |     |                                                                  
             |     |                                              /------- XP_009133732.1/9-58   (19)
             |     |----------------------85----------------------+                   
             |     |                                              \------- XP_009143157.1/9-58   (59)
             |     |                                                                  
             |     |                                 /-------------------- XP_009123192.1/10-59  (23)
             |     |                                 |                                
             |     |                                 |            /------- XP_009138271.1/9-59   (27)
             |     |                                 |-----91-----+                   
             |     |                                 |            \------- XP_009115272.1/9-59   (31)
             |     |----------------69---------------+                                
             |     |                                 |            /------- XP_009117344.1/10-59  (28)
             |     |                                 |      /--85-+                   
             |     |                                 |      |     \------- XP_009140371.1/9-59   (58)
             |     |                                 |      |                         
             |     |                                 \--76--+------------- XP_009131941.1/10-59  (56)
             |     |                                        |                         
             |     |                                        \------------- XP_009109406.1/10-59  (68)
             |     |                                                                  
             |     |------------------------------------------------------ XP_009115015.1/1-31   (25)
             |     |                                                                  
             |     |                                              /------- XP_009141444.1/9-59   (32)
             |     |                                        /--71-+                   
             |     |                                        |     \------- XP_009136371.1/25-75  (40)
             |     |-------------------100------------------+                         
             |     |                                        \------------- XP_009130118.1/25-74  (63)
             |     |                                                                  
             |     |                                              /------- XP_009137453.1/9-59   (48)
             |     |                                        /--93-+                   
             |     |                                        |     \------- XP_009138166.1/9-59   (65)
             |     |-------------------100------------------+                         
             |     |                                        |     /------- XP_009112514.1/10-59  (51)
             |     |                                        \--57-+                   
             |     |                                              \------- XP_009140365.1/10-59  (71)
             |     |                                                                  
             |     |                                              /------- XP_009131359.1/9-59   (74)
             |     \----------------------100---------------------+                   
             |                                                    \------- XP_009121726.1/9-59   (79)
             |                                                                        
             \------------------------------------------------------------ XP_009106441.1/9-58   (47)
                                                                                      

Phylogenetic tree for protein ? help Back to Top

      Subtree rooted at node 168:

                                                               /---------- XP_009142352.1 (2)
                                                               |                      
                                                    /----100---+    /----- XP_009133734.1 (11)
                                                    |          \-99-+                 
                                                    |               \----- XP_009143158.1 (73)
                                                    |                                 
                                          /----93---+          /---------- XP_009137303.1 (25)
                                          |         |          |                      
                                          |         |     /-100+    /----- XP_009108594.1 (45)
                                          |         |     |    \-99-+                 
                                          |         \-100-+         \----- XP_009136496.1 (56)
                                          |               |                           
                                          |               \--------------- XP_009114655.1 (79)
                                          |                                           
                                          |                         /----- XP_009107033.1 (6)
                                          |         /------100------+                 
                                /---100---+         |               \----- XP_009132580.1 (26)
                                |         |         |                                 
                                |         |         |               /----- XP_009139222.1 (36)
                                |         |         |          /-100+                 
                                |         |    /-100+          |    \----- XP_009109211.1 (78)
                                |         |    |    |     /-100+                      
                                |         |    |    |     |    |    /----- XP_009136477.1 (37)
                                |         |    |    |     |    \-100+                 
                                |         |    |    \--99-+         \----- XP_009130170.1 (61)
                                |         |    |          |                           
                                |         \-100+          |         /----- XP_009107059.1 (52)
                                |              |          \---100---+                 
                                |              |                    \----- XP_009132582.1 (88)
                                |              |                                      
                                |              |                    /----- XP_009112008.1 (48)
                                |              \---------100--------+                 
                                |                                   \----- XP_009130198.1 (66)
                                |                                                     
                                |                                   /----- XP_009126431.1 (3)
                                |                                   |                 
                                |                         /---100---+----- XP_009131786.1 (43)
                                |                         |         |                 
                                |                         |         \----- XP_009120826.1 (58)
                                |                         |                           
                                |                   /--89-+         /----- XP_009141444.1 (33)
                                |                   |     |    /-61-+                 
                                |                   |     |    |    \----- XP_009130118.1 (39)
                                |                   |     \-100+                      
                                |    /------100-----+          \---------- XP_009136371.1 (60)
                                |    |              |                                 
                                |    |              |               /----- XP_009116122.1 (16)
                                |    |              \------100------+                 
                                |    |                              \----- XP_009139246.1 (84)
                                |    |                                                
                                |    |                              /----- XP_009112514.1 (4)
                                |    |                         /-100+                 
                                |    |                         |    \----- XP_009140365.1 (53)
                                |    |         /------100------+                      
                                |    |         |               |    /----- XP_009138166.1 (81)
                                |    |         |               \-100+                 
                                |    |         |                    \----- XP_009137453.1 (89)
                                |-83-+         |                                      
                                |    |         |                    /----- XP_009140371.1 (13)
                                |    |         |               /-100+                 
                                |    |    /-76-+               |    \----- XP_009117344.1 (30)
                                |    |    |    |          /-100+                      
                                |    |    |    |          |    |    /----- XP_009131941.1 (71)
                                |    |    |    |          |    \-100+                 
                                |    |    |    |    /--75-+         \----- XP_009109406.1 (85)
                                |    |    |    |    |     |                           
                                |    |    |    |    |     |         /----- XP_009115272.1 (74)
                                |    |    |    \-100+     \---100---+                 
                                |    |    |         |               \----- XP_009138271.1 (77)
                                |    |    |         |                                 
                                |    \-90-+         \--------------------- XP_009123192.1 (27)
                                |         |                                           
                                |         |                         /----- XP_009104054.1 (10)
                                |         |                    /-100+                 
                                |         |                    |    \----- XP_009116442.1 (49)
                                |         |               /-97-+                      
                                |         |               |    \---------- XP_009139036.1 (68)
                                |         |         /-100-+                           
                                |         |         |     \--------------- XP_009147629.1 (87)
                                |         \---100---+                                 
                                |                   |               /----- XP_009121726.1 (23)
                                |                   \------100------+                 
                                |                                   \----- XP_009131359.1 (47)
                                |                                                     
                           /-96-+                         /--------------- XP_009150584.1 (5)
                           |    |                         |                           
                           |    |                   /--87-+    /---------- XP_009130488.1 (21)
                           |    |                   |     |    |                      
                           |    |                   |     \-100+    /----- XP_009130489.1 (22)
                           |    |              /-100+          \-79-+                 
                           |    |              |    |               \----- XP_009150582.1 (83)
                           |    |              |    |                                 
                           |    |              |    \--------------------- XP_009130486.1 (19)
                           |    |              |                                      
                           |    |         /-100+                    /----- XP_009132707.1 (17)
                           |    |         |    |               /-59-+                 
                           |    |         |    |               |    \----- XP_009125323.1 (55)
                           |    |         |    |          /-84-+                      
                           |    |----97---+    |          |    \---------- XP_009131145.1 (54)
                           |    |         |    \----100---+                           
                           |    |         |               \--------------- XP_009122081.1 (70)
                           |    |         |                                           
                           |    |         \------------------------------- XP_009115015.1 (41)
                           |    |                                                     
                           |    |                                   /----- XP_009121545.1 (7)
                           |    |                              /-99-+                 
                           |    |                              |    \----- XP_009131500.1 (40)
                           |    |                         /-100+                      
                           |    |                         |    |    /----- XP_009147359.1 (20)
                           |    |                         |    \-100+                 
                           |    |                   /--82-+         \----- XP_009117898.1 (29)
                           |    |                   |     |                           
                           |    |                   |     |         /----- XP_009152152.1 (44)
                           |    |                   |     \---100---+                 
                           |    |         /---100---+               \----- XP_009129078.1 (59)
                           |    |         |         |                                 
                           |    |         |         |               /----- XP_009102994.1 (18)
                           |    |         |         |               |                 
                           |    |         |         \------100------+----- XP_009113782.1 (38)
                           |    |         |                         |                 
                           |    |         |                         \----- XP_009109825.1 (64)
                           |    |         |                                           
                     /-100-+    |    /-100+                         /----- XP_009111804.1 (8)
                     |     |    |    |    |                    /-73-+                 
                     |     |    |    |    |                    |    \----- XP_009129675.1 (15)
                     |     |    |    |    |    /------100------+                      
                     |     |    |    |    |    |               \---------- XP_009151758.1 (28)
                     |     |    |    |    |    |                                      
                     |     |    |    |    |    |               /---------- XP_009111964.1 (12)
                     |     |    |    |    |    |               |                      
                     |     |    |    |    \-100+    /----100---+    /----- XP_009136412.1 (14)
                     |     |    |    |         |    |          \-86-+                 
                     |     |    |    |         |    |               \----- XP_009130138.1 (24)
                     |     |    |-99-+         |    |                                 
                     |     |    |    |         |    |               /----- XP_009105460.1 (34)
                     |     |    |    |         \-100+          /-89-+                 
                     |     |    |    |              |          |    \----- XP_009105010.1 (65)
                     |     |    |    |              |     /-100+                      
                     |     |    |    |              |     |    \---------- XP_009127703.1 (82)
                     |     |    |    |              \-100-+                           
                     |     |    |    |                    \--------------- XP_009109914.1 (72)
                     |     |    |    |                                                
                     |     |    |    |                         /---------- XP_009138791.1 (32)
                /-80-+     |    |    |                         |                      
                |    |     |    |    \-----------100-----------+    /----- XP_009143157.1 (57)
                |    |     |    |                              \-100+                 
                |    |     |    |                                   \----- XP_009133732.1 (67)
                |    |     |    |                                                     
                |    |     |    |                              /---------- XP_009106441.1 (42)
                |    |     |    |                              |                      
                |    |     |    |                         /-100+    /----- XP_009103260.1 (69)
                |    |     |    |                         |    \-100+                 
                |    |     |    \------------92-----------+         \----- XP_009110147.1 (86)
                |    |     |                              |                           
                |    |     |                              \--------------- XP_009105505.1 (51)
           /-100+    |     |                                                          
           |    |    |     |                                        /----- XP_009127862.1 (63)
           |    |    |     |                                   /-78-+                 
           |    |    |     |                                   |    \----- XP_009105825.1 (80)
           |    |    |     \----------------100----------------+                      
           |    |    |                                         \---------- XP_009104908.1 (75)
           |    |    |                                                                
           |    |    |                                              /----- XP_009113581.1 (9)
      --100+    |    \----------------------100---------------------+                 
           |    |                                                   \----- XP_009134170.1 (50)
           |    |                                                                     
           |    |                                                   /----- XP_009132356.1 (31)
           |    \------------------------100------------------------+                 
           |                                                        \----- XP_009136975.1 (62)
           |                                                                          
           \-------------------------------------------------------------- XP_009142866.1 (76)
                                                                                      
      Root part of tree:

      /------------------------------------------------------------------- XP_009104172.1 (1)
      |                                                                               
      |------------------------------------------------------------------- XP_009138935.1 (35)
      +                                                                               
      |                                 /--------------------------------- (168)
      \---------------100---------------+                                             
                                        \--------------------------------- XP_009116562.1 (46)