PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGRP550
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 131: /----- GRMZM2G006042_P03 [Zea mays] (4) /-100+ | \----- Sobic.008G096000.1.p [Sorghum bicolor] (53) /-100+ | \---------- GRMZM2G352159_P04 [Zea mays] (70) /-100-+ | | /----- Bradi4g07470.1.p [Brachypodium distachyon] (43) | \---100---+ | \----- LOC_Os12g29520.1 [Oryza sativa japonica] (73) /-100+ | | /----- Sobic.005G132000.1.p [Sorghum bicolor] (30) | | /-100+ | | | \----- GRMZM2G378580_P01 [Zea mays] (54) | \----100---+ | | /----- Bradi4g17410.1.p [Brachypodium distachyon] (56) | \-97-+ /---------93--------+ \----- LOC_Os11g32110.1 [Oryza sativa japonica] (77) | | | | /----- Bradi2g59480.1.p [Brachypodium distachyon] (34) | | /---100---+ | | | \----- LOC_Os01g70270.1 [Oryza sativa japonica] (65) | | | | \----100---+ /---------- GRMZM2G116557_P02 [Zea mays] (46) | | | | \-100+ /----- GRMZM2G338259_P01 [Zea mays] (55) | \-62-+ | \----- Sobic.003G411900.1.p [Sorghum bicolor] (74) | | /----- Glyma.08G008100.1.p [Glycine max] (9) | /-100+ | | \----- Glyma.05G200800.1.p [Glycine max] (13) | /-100+ | | | /----- Glyma.04G200600.1.p [Glycine max] (36) /--68-+ | \-100+ | | /--97-+ \----- Glyma.06G164900.1.p [Glycine max] (68) | | | | | | /-84-+ \--------------- AT5G62000.1 [Arabidopsis thaliana] (62) | | | | | | | \--------------------- evm.TU.contig_31756.1 [Carica papaya] (31) | | /-97-+ | | | | /----- Potri.012G106100.1 [Populus trichocarpa] (16) | | | \---------100--------+ | | /-97-+ \----- Potri.015G105300.3 [Populus trichocarpa] (18) | | | | | | | \------------------------------- GSVIVT01008639001 [Vitis vinifera] (23) /-87-+ | /-100+ | | | | | /----- Solyc03g118290.2.1 [Solanum lycopersicum] (24) | | | | \--------------100-------------+ | | | | \----- Solyc12g042070.1.1 [Solanum lycopersicum] (57) | | \-94-+ | | | /----- Potri.001G066200.1 [Populus trichocarpa] (33) | | | /-100+ /-65-+ | | | \----- Potri.003G163600.1 [Populus trichocarpa] (60) | | | \--------------98--------------+ | | | \---------- GSVIVT01004942001 [Vitis vinifera] (78) | | | --89-+ | \---------------------------------------------------- evm_27.model.AmTr_v1.0_scaffold00016.128 [Amborella trichopoda] (5) | | | \--------------------------------------------------------- evm_27.model.AmTr_v1.0_scaffold00057.126 [Amborella trichopoda] (41) | \-------------------------------------------------------------- Potri.002G207100.1 [Populus trichocarpa] (44) Subtree rooted at node 153: /-------------------------- GSVIVT01019566001 [Vitis vinifera] (2) | | /----- Glyma.07G134800.1.p [Glycine max] (10) | /-100+ | | \----- Glyma.18G184500.1.p [Glycine max] (29) | /-100+ /-95-+ | | /----- Glyma.03G070500.1.p [Glycine max] (35) | | | \-100+ | | /--53-+ \----- Glyma.01G103500.1.p [Glycine max] (71) | | | | | | | \--------------- AT4G23980.1 [Arabidopsis thaliana] (80) | | | | \-95-+--------------------- evm.model.supercontig_15.1 [Carica papaya] (20) /-100+ | | | | /----- Potri.001G088600.1 [Populus trichocarpa] (38) | | \------100------+ | | \----- Potri.003G142100.1 [Populus trichocarpa] (59) | | | | /----- Solyc08g008380.2.1 [Solanum lycopersicum] (26) | \-----------100-----------+ | \----- Solyc08g082630.2.1 [Solanum lycopersicum] (66) /-69-+ | | /----- Solyc01g096070.2.1 [Solanum lycopersicum] (15) | | /-------51------+ | | | \----- GSVIVT01027166001 [Vitis vinifera] (17) | | | | | | /----- Potri.002G172800.1 [Populus trichocarpa] (19) | | | /-100+ | \------69------+ | \----- Potri.014G100100.1 [Populus trichocarpa] (37) | | /-69-+ /-100+ | | \---------- evm.model.supercontig_96.40 [Carica papaya] (61) | | | | | | \--74-+ /----- Glyma.07G054800.1.p [Glycine max] (39) | | | /-100+ | | | | \----- Glyma.16G023600.1.p [Glycine max] (48) | | \-100+ /--63-+ | \---------- Glyma.03G258300.1.p [Glycine max] (52) | | | | | | /----- AT3G61830.1 [Arabidopsis thaliana] (50) | | \----------------100----------------+ | | \----- AT2G46530.3 [Arabidopsis thaliana] (72) | | | \---------------------------------------------- evm_27.model.AmTr_v1.0_scaffold00021.210 [Amborella trichopoda] (6) | | /--------------- (131) /-100+ | | | /----72----+ /---------- MA_10432580g0010 [Picea abies] (27) | | | | | | | | \-100+ /----- MA_92651g0010 [Picea abies] (40) | | | \-74-+ | | | \----- MA_40335g0010 [Picea abies] (42) | | | | | | /----- 437944 [Selaginella moellendorffii] (11) | \-----------100-----------+ /-100+ | | | \----- 81992 [Selaginella moellendorffii] (49) | | /----95----+ | | | \---------- MA_10432349g0010 [Picea abies] (51) | | | | | | /----- Pp3c27_60V3.1.p [Physcomitrella patens] (12) | | | /-100+ | \-100+ | \----- Pp3c16_6100V3.1.p [Physcomitrella patens] (82) /-100+ | /-100+ | | | | | /----- Pp3c5_9420V3.1.p [Physcomitrella patens] (79) | | | | \-100+ | | \-100-+ \----- Pp3c6_21370V3.2.p [Physcomitrella patens] (81) | | | | | \--------------- Mapoly0011s0167.1.p [Marchantia polymorpha] (67) | | | | /---------- GRMZM2G137413_P01 [Zea mays] (3) | | | | | /-100+ /----- Sobic.004G178500.1.p [Sorghum bicolor] (8) | | | \-89-+ | | | \----- GRMZM2G702026_P01 [Zea mays] (22) | | /-100-+ --68-+ | | | /----- LOC_Os02g35140.1 [Oryza sativa japonica] (58) | | | \----82---+ | | | \----- Bradi3g45880.2.p [Brachypodium distachyon] (76) | \----------------100----------------+ | | /--------------- Bradi5g10950.1.p [Brachypodium distachyon] (32) | | | | \-100-+ /---------- LOC_Os04g36054.1 [Oryza sativa japonica] (45) | | | | \-85-+ /----- GRMZM2G017187_P02 [Zea mays] (64) | \-100+ | \----- Sobic.006G089500.1.p [Sorghum bicolor] (69) | \-------------------------------------------------------------- GSVIVT01037136001 [Vitis vinifera] (7) Root part of tree: /------------------------------------------------------------------- Glyma.07G272800.1.p [Glycine max] (1) | | /------------- (153) | /------94-----+ | | \------------- AT1G59750.1 [Arabidopsis thaliana] (28) | /-----82-----+ | | \--------------------------- Solyc01g103050.2.1 [Solanum lycopersicum] (21) | /-----100-----+ + | \---------------------------------------- GSVIVT01023149001 [Vitis vinifera] (14) |-----100----+ | | /------------- Potri.003G001000.1 [Populus trichocarpa] (25) | \-------------------100------------------+ | \------------- Potri.004G228800.1 [Populus trichocarpa] (63) | | /------------- Glyma.12G164100.1.p [Glycine max] (47) \-------------------------100-------------------------+ \------------- Glyma.16G000300.1.p [Glycine max] (75) |