PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP1707
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Subtree rooted at node 192: /----- OB04G26810.1 [Oryza brachyantha] (2) /---------78--------+ | \----- LPERR04G16000.1 [Leersia perrieri] (50) | | /---------- ONIVA04G17950.1 [Oryza nivara] (9) | | | |---------- KN539042.1_FGP008 [Oryza longistaminata] (48) | | | |---------- OBART04G19730.1 [Oryza barthii] (51) | | | |---------- ORGLA10G0151700.1 [Oryza glaberrima] (53) /-99-+ | | | /-72-+---------- ORGLA04G0168700.1 [Oryza glaberrima] (63) | | | | | | | | /----- LOC_Os04g45020.1 [Oryza sativa japonica] (70) | | | |-95-+ | | | | \----- BGIOSGA016820-PA [Oryza sativa indica] (83) | | /-87-+ | | | | | |---------- OGLUM04G19590.1 [Oryza glumaepatula] (90) | | | | | | | | | \---------- ORUFI04G21270.1 [Oryza rufipogon] (99) | \-99-+ | | | \--------------- OMERI04G16730.1 [Oryza meridionalis] (78) | | | \-------------------- OPUNC04G17450.1 [Oryza punctata] (72) | | /----- Traes_2DL_304E62CCE.1 [Triticum aestivum] (4) | /-97-+ | | \----- EMT27607 [Aegilops tauschii] (40) | | /----53----+ /-89-+---------- Traes_2BL_35241DE8D.1 [Triticum aestivum] (13) | | | | | | | | /----- TRIUR3_15020-P1 [Triticum urartu] (66) | | | \-100+ | | | \----- Traes_2AL_2D4100475.1 [Triticum aestivum] (77) | | /-71-+ | | | |--------------- MLOC_73614.1 [Hordeum vulgare] (26) | | | | | | | |--------------- Traes_2BL_7CEC6A8D7.1 [Triticum aestivum] (29) | | | | | | | \--------------- EMT06705 [Aegilops tauschii] (71) | | | | | /-81-+ /----- Traes_2BL_604FE7639.1 [Triticum aestivum] (20) | | | | /-100+ | | | | | \----- Traes_2BL_03F3475CD.1 [Triticum aestivum] (120) | | | | /-91-+ | | | | | \---------- Traes_2AL_962A9D448.1 [Triticum aestivum] (58) | | | | | | | | \-100+ /---------- TRIUR3_27902-P1 [Triticum urartu] (55) | \-81-+ | | | | \-99-+ /----- TRIUR3_15022-P1 [Triticum urartu] (87) | | \-100+ | | \----- Traes_2AL_AF9357B4C.1 [Triticum aestivum] (95) | | | | /----- Bradi5g16672.1.p [Brachypodium distachyon] (18) | \--------100--------+ | \----- Brast09G153600.1.p [Brachypodium stacei] (69) | | /-------------------- Sobic.006G159100.1.p [Sorghum bicolor] (5) | | | |-------------------- Do009279.1 [Dichanthelium oligosanthes] (6) | | | | /---------- Pahal.G01398.1 [Panicum hallii] (49) /-99-+ /----80---+ | | | | | /-100+ /----- Pavir.7KG264000.1.p [Panicum virgatum] (74) | | | | | \-100+ | | | | | \----- Pavir.7NG329900.1.p [Panicum virgatum] (100) | | | \-86-+ | | | | /----- Sevir.7G189300.1.p [Setaria viridis] (59) | | | \---100---+ | | | \----- Seita.7G179600.1.p [Setaria italica] (86) | | | | | /--64-+ /----- Zpz_sc00091.1.g00150.1.am.mk [Zoysia pacifica] (16) | | | | /-95-+ | | | | | \----- Zmw_sc04045.1.g00030.1 [Zoysia matrella] (54) | | | | /------100-----+ | | | | | | /----- Zmw_sc01898.1.g00190.1 [Zoysia matrella] (41) | | | | | \-100+ | | | | | \----- Zjn_sc00056.1.g03330.1.am.mk [Zoysia japonica] (52) | | | | | | | | \-97-+ /-------------------- Oropetium_20150105_12203A [Oropetium thomaeum] (24) | | | | | | |-67-+ | | /----- Zjn_sc00004.1.g05440.1.am.mk [Zoysia japonica] (46) | | | | | /-71-+ | | | \-63-+ | \----- Zmw_sc01576.1.g00230.1 [Zoysia matrella] (47) | | | | /-86-+ | | | | | \---------- Zpz_sc01939.1.g00120.1.am.mk [Zoysia pacifica] (110) | | | \-100+ | | | \--------------- Zmw_sc06266.1.g00030.1 [Zoysia matrella] (84) | | | | | | /----- 462876299 [Eragrostis tef] (39) | | \--------------100-------------+ | | \----- 462965173 [Eragrostis tef] (94) | | | | /----- PH01000028G0940 [Phyllostachys heterocycla] (65) /-75-+ \----------------100----------------+ | | \----- PH01000001G2130 [Phyllostachys heterocycla] (75) | | | | /----- PDK_30s6550955g009 [Phoenix dactylifera] (12) | | /------100-----+ | | | \----- XP_010905133.1 [Elaeis guineensis] (30) | | | | | | /----- PDK_30s1040171g001 [Phoenix dactylifera] (37) | | | /-100+ | | /-57-+ | \----- XP_010934813.1 [Elaeis guineensis] (82) | | | | /-100+ | | | | | | /----- XP_010940754.1 [Elaeis guineensis] (44) | | | | | \-100+ | | | \-55-+ \----- PDK_30s837411g011 [Phoenix dactylifera] (85) | | | | | | /-78-+ \--------------- PEQU_15257 [Phalaenopsis equestris] (92) | | | | | | | | /----- GSMUA_Achr4P29410_001 [Musa acuminata] (15) | | | | /-100+ | | | | | \----- GSMUA_Achr2P11450_001 [Musa acuminata] (170) | | | \------60------+ | | | \---------- Aco007619.1 [Ananas comosus] (31) /-50-+ | /--51-+ | | | | | /---------- Traes_6BS_B2C9F123A.1 [Triticum aestivum] (43) | | | | | | | | | | | /-99-+ /----- Zmw_sc02767.1.g00100.1 [Zoysia matrella] (89) | | | | | | \-100+ | | | | | | \----- Zpz_sc01467.1.g00040.1.sm.mk [Zoysia pacifica] (97) | | | | \------100-----+ | | | | | /----- Aco022792.1 [Ananas comosus] (60) | | | | \---100---+ | | | | \----- Aco010274.1 [Ananas comosus] (140) | | \----93---+ | | | /----- PEQU_03213 [Phalaenopsis equestris] (14) | | |--------------68--------------+ | | | \----- GSMUA_Achr4P25340_001 [Musa acuminata] (57) | | | | | | /----- Spipo1G0034400 [Spirodela polyrhiza] (67) | | |--------------59--------------+ | | | \----- GSMUA_Achr8P11340_001 [Musa acuminata] (130) | | | | | \------------------------------------ Aco016294.1 [Ananas comosus] (79) | | | | /----- Traes_6DL_A014E9069.1 [Triticum aestivum] (25) /-50-+ \----------------------50---------------------+ | | \----- Traes_6BL_CE61B9510.1 [Triticum aestivum] (38) | | | | /---------- Zjn_sc00022.1.g07570.1.sm.mkhc [Zoysia japonica] (8) | | | | | /-100+ /----- Zmw_sc01745.1.g00040.1 [Zoysia matrella] (80) | | | \-91-+ | | | \----- Zpz_sc01606.1.g00040.1.sm.mkhc [Zoysia pacifica] (96) | | | | | /-99-+ /----- Zjn_sc00007.1.g11070.1.sm.mkhc [Zoysia japonica] (10) | | | | /-72-+ | | | | | \----- Zmw_sc03747.1.g00130.1 [Zoysia matrella] (34) | | | \-100+ | | | | /----- Zmw_sc04777.1.g00030.1 [Zoysia matrella] (19) | | /-91-+ \-66-+ | | | | \----- Zpz_sc00346.1.g00170.1.sm.mkhc [Zoysia pacifica] (28) | | | | | | | | /---------- Oropetium_20150105_02870A [Oropetium thomaeum] (64) | | | | | | | | \----77---+ /----- 462945242 [Eragrostis tef] (81) | | | \-100+ | | | \----- 462904594 [Eragrostis tef] (180) | \--------------93--------------+ --83-+ | /---------- Sobic.004G303600.1.p [Sorghum bicolor] (11) | | | | | /----97---+ /----- GRMZM2G170049_P01 [Zea mays] (27) | | | \-64-+ | | | \----- GRMZM2G496770_P01 [Zea mays] (35) | | | | | | /----- Pavir.1KG410400.1.p [Panicum virgatum] (23) | \-94-+ /-100+ | | | \----- Pavir.1NG369100.1.p [Panicum virgatum] (68) | | /-100+ | | | \---------- Pahal.A02723.1 [Panicum hallii] (32) | \-100+ | | /----- Seita.1G250600.1.p [Setaria italica] (88) | \---100---+ | \----- Sevir.1G254900.1.p [Setaria viridis] (91) | | /---------- EMT26625 [Aegilops tauschii] (7) | | | |---------- MLOC_13019.2 [Hordeum vulgare] (17) | /-50-+ | | | /----- Traes_6AL_D10CBA40D.1 [Triticum aestivum] (36) | | \-100+ \----------------------50---------------------+ \----- TRIUR3_32691-P1 [Triticum urartu] (98) | | /----- Brast04G124600.1.p [Brachypodium stacei] (33) \---100---+ \----- Bradi3g49970.1.p [Brachypodium distachyon] (93) Root part of tree: /------------------------------------------------------------------ OPUNC02G23410.1 [Oryza punctata] (1) | | /-------------------------- BGIOSGA008698-PA [Oryza sativa indica] (21) | | | | /------------- LOC_Os02g42850.2 [Oryza sativa japonica] (56) | |-----99-----+ | | \------------- ORUFI02G26980.1 [Oryza rufipogon] (150) | | | | /------------- OBART02G25570.1 [Oryza barthii] (61) | /------75-----+-----99-----+ | | | \------------- ORGLA02G0219000.1 [Oryza glaberrima] (62) | | | | | |-------------------------- OMERI02G25080.1 [Oryza meridionalis] (73) + | | |------------82-----------+ |-------------------------- ONIVA02G28010.1 [Oryza nivara] (160) | | | | | \-------------------------- OGLUM02G26100.1 [Oryza glumaepatula] (190) | | | \---------------------------------------- KN539013.1_FGP006 [Oryza longistaminata] (22) | | /-------------------------- (192) | | | /-----100-----+ /------------- PH01001738G0330 [Phyllostachys heterocycla] (42) | | \-----86-----+ | /-----51-----+ \------------- PH01000415G0090 [Phyllostachys heterocycla] (45) | | | \-----66-----+ \---------------------------------------- OB02G32950.1 [Oryza brachyantha] (3) | \----------------------------------------------------- ORGLA02G0218900.1 [Oryza glaberrima] (76) |