PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP1347
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Subtree rooted at node 185: /---------------------------------------------- PEQU_13371 [Phalaenopsis equestris] (2) | |---------------------------------------------- Spipo5G0038000 [Spirodela polyrhiza] (3) | | /---------- Spipo14G0025600 [Spirodela polyrhiza] (6) | | | /--------------98--------------+ /----- PEQU_26907 [Phalaenopsis equestris] (26) | | \-78-+ | | \----- XP_010912488.1 [Elaeis guineensis] (48) | | | | /--------------- Sevir.6G050700.1.p [Setaria viridis] (9) | | | | | |--------------- LPERR08G03560.2 [Leersia perrieri] (10) | | | | | |--------------- OPUNC08G03400.1 [Oryza punctata] (16) | | | | | |--------------- PH01001063G0080 [Phyllostachys heterocycla] (24) | | | | | |--------------- GRMZM2G055135_P03 [Zea mays] (25) | | | | | | /----- PH01001344G0480 [Phyllostachys heterocycla] (33) | | | | | | | |----- 462929626 [Eragrostis tef] (38) | | |----58---+ | | | |----- Do002986.1 [Dichanthelium oligosanthes] (62) | | | | | | | \----- KN538681.1_FGP108 [Oryza longistaminata] (120) | | | | | | /----- Traes_1BL_332C278BD.2 [Triticum aestivum] (41) | | | | | | | |----- Traes_1DL_263F80870.1 [Triticum aestivum] (58) | | | /-61-+ | | | | |----- Traes_1AL_4B7636BC9.1 [Triticum aestivum] (64) | | | | | | | |-80-+ \----- EMT24478 [Aegilops tauschii] (94) | | | | | | | \---------- MLOC_53966.1 [Hordeum vulgare] (140) | | | | | |--------------- 462892842 [Eragrostis tef] (51) | | | | | /-84-+--------------- ORUFI08G03990.2 [Oryza rufipogon] (53) | | | | | | | |--------------- BGIOSGA027617-PA [Oryza sativa indica] (56) | | | | |-53-+ | |--------------- Pavir.6NG062800.1.p [Panicum virgatum] (61) | | | | | | | |--------------- OB08G13830.1 [Oryza brachyantha] (68) | | | | | | | |--------------- OBART08G03580.1 [Oryza barthii] (71) | | | | | | | |--------------- OMERI08G03640.1 [Oryza meridionalis] (72) | | | | | | | | /----- ORGLA08G0030200.1 [Oryza glaberrima] (76) | | | |----65---+ /-55-+ | | | \----- LOC_Os08g06280.1 [Oryza sativa japonica] (119) | | | | | | | | /-76-+ |--------------- Seita.6G053800.1.p [Setaria italica] (87) | | | | | | | | | | | |--------------- Brast03G019200.1.p [Brachypodium stacei] (90) | | | | | | | | | | | |--------------- Sobic.007G050100.1.p [Sorghum bicolor] (99) | | | | | | | | | | | |--------------- Bradi3g16400.2.p [Brachypodium distachyon] (110) | | | | | | | | | | | |--------------- OGLUM08G03690.1 [Oryza glumaepatula] (130) | | | /-65-+ | | | | | | | | |--------------- ONIVA08G03570.1 [Oryza nivara] (190) | | | | | | | | | | | | | |--------------- Pahal.F01058.1 [Panicum hallii] (110) | | | | | | | | | | | | | \--------------- Pavir.6KG062100.1.p [Panicum virgatum] (121) | | | /--68-+ | | | | | | | | \-------------------- Oropetium_20150105_23170A [Oropetium thomaeum] (97) | | | | | | | | | | | \------------------------- Spipo17G0001300 [Spirodela polyrhiza] (112) | | | | | | | | | \------------------------------ Aco013206.1 [Ananas comosus] (29) | | | | | | | | /----- GSMUA_Achr7P04710_001 [Musa acuminata] (18) | | | | /-99-+ | | | | | \----- GSMUA_AchrUn_randomP02930_001 [Musa acuminata] (66) | | | |------------79-----------+ | | \-99-+ \---------- GSMUA_Achr3P27560_001 [Musa acuminata] (65) | | | | | | /----- Zosma85g00880.1 [Zostera marina] (32) | | |--------------66--------------+ | | | \----- PEQU_33650 [Phalaenopsis equestris] (67) | | | | | | /----- XP_010941225.1 [Elaeis guineensis] (52) | | |--------------98--------------+ | | | \----- PDK_30s996781g003 [Phoenix dactylifera] (96) | | | | | \------------------------------------ XP_010919877.1 [Elaeis guineensis] (150) | | | | /----- GSMUA_Achr7P08020_001 [Musa acuminata] (20) | |-------------------95-------------------+ | | \----- GSMUA_Achr6P31340_001 [Musa acuminata] (50) | | | | /----- Zosma330g00200.1 [Zostera marina] (49) | |-------------------57-------------------+ | | \----- Aco007447.1 [Ananas comosus] (170) | | | | /----- PDK_30s659141g002 [Phoenix dactylifera] (55) | | /-81-+ | | | \----- XP_010906718.1 [Elaeis guineensis] (123) | |-----------------97----------------+ | | \---------- XP_010904647.1 [Elaeis guineensis] (160) | | | \---------------------------------------------- GSMUA_Achr7P00950_001 [Musa acuminata] (83) | | /---------- LOC_Os12g41700.1 [Oryza sativa japonica] (4) | | | |---------- OGLUM12G20170.1 [Oryza glumaepatula] (28) | | | | /----- OMERI12G13160.1 [Oryza meridionalis] (36) /-81-+ | | | | |-100+----- OPUNC12G16710.1 [Oryza punctata] (81) | | /-95-+ | | | | | \----- ORUFI12G20660.2 [Oryza rufipogon] (88) | | | | | | | |---------- ONIVA12G17410.1 [Oryza nivara] (42) | | | | | | /-100+ |---------- ORGLA12G0157700.1 [Oryza glaberrima] (120) | | | | | | | | | \---------- OBART12G18510.1 [Oryza barthii] (124) | | /-100+ | | | | | \--------------- BGIOSGA035855-PA [Oryza sativa indica] (70) | | | | | | /-61-+ \-------------------- LPERR12G15530.1 [Leersia perrieri] (74) | | | | | | | \------------------------- PH01000183G1300 [Phyllostachys heterocycla] (14) | | | | | | /--------------- Traes_5AS_B310AA218.1 [Triticum aestivum] (5) | | | | | | | | /----- EMT22195 [Aegilops tauschii] (11) | | /--51-+ | /-75-+ | | | | | | \----- Traes_5DS_522EE613C.2 [Triticum aestivum] (73) | | | | /-100+-68-+ | | | | | | \---------- Traes_5BS_4179BB1C5.1 [Triticum aestivum] (39) | | | | | | | | | | | |--------------- MLOC_64242.2 [Hordeum vulgare] (27) | | | \---100---+ | | | | | \--------------- TRIUR3_03600-P1 [Triticum urartu] (69) | | | | | | | | /----- Brast10G019500.1.p [Brachypodium stacei] (44) | | | \------100-----+ | |------50------+ \----- Bradi4g02040.1.p [Brachypodium distachyon] (113) | | | | | | /----- Zpz_sc00563.1.g00330.1.es.mkhc [Zoysia pacifica] (15) | | | | | | | |----- Oropetium_20150105_18220A [Oropetium thomaeum] (40) | | | /------81------+ | | | | |----- 462878284 [Eragrostis tef] (86) | | | | | | | | | \----- 462882351 [Eragrostis tef] (91) | | | | | | | | /----- Sobic.008G165000.1.p [Sorghum bicolor] (47) | | \-------59------+ /----68---+ | | | | \----- GRMZM2G114613_P02 [Zea mays] (80) /-100+ | | | | | | | | /----- Seita.3G386400.1.p [Setaria italica] (77) | | | | | /-100+ | | | \-58-+ | \----- Sevir.3G402500.1.p [Setaria viridis] (92) | | | | | | | | | | /----- Pavir.3KG535400.1.p [Panicum virgatum] (85) | | | | |-80-+ | | | \-74-+ \----- Pavir.3NG284600.1.p [Panicum virgatum] (114) | | | | | | | |---------- Do016044.1 [Dichanthelium oligosanthes] (100) | | | | | | | \---------- Pahal.C04716.1 [Panicum hallii] (122) | | | | | |--------------------------------------------------- PEQU_29608 [Phalaenopsis equestris] (21) | | | | | | /----- Aco005061.1 [Ananas comosus] (30) | | \----------------------81---------------------+ | | \----- Aco008687.1 [Ananas comosus] (117) | | | | /-------------------- Traes_5DL_898B0A5A7.1 [Triticum aestivum] (8) | | | | | | /----- MLOC_25818.1 [Hordeum vulgare] (22) | | |------99------+ | | | \----- MLOC_2356.1 [Hordeum vulgare] (82) | | /-86-+ | | | | /--------------- Traes_5BL_4E60DC151.1 [Triticum aestivum] (31) | | | | | | | | | | /----- Traes_5AL_4E653044F.1 [Triticum aestivum] (43) | | | \-58-+ /-91-+ | | /-64-+ | | \----- MLOC_4091.1 [Hordeum vulgare] (60) | | | | \-88-+ | | | | \---------- TRIUR3_17786-P1 [Triticum urartu] (63) | | | | | | | | /----- Brast02G242300.1.p [Brachypodium stacei] (46) | | | \--------100--------+ | | | \----- Bradi1g13971.1.p [Brachypodium distachyon] (118) --100+ | | | | | /---------- ONIVA03G28290.1 [Oryza nivara] (12) | | | | | | | |---------- OMERI03G24390.1 [Oryza meridionalis] (13) | | | | | | | |---------- BGIOSGA010175-PA [Oryza sativa indica] (35) | | | | | | | /-97-+ /----- OBART03G27110.1 [Oryza barthii] (79) | \------------59-----------+ | |-100+ | | | | \----- ORUFI03G28180.1 [Oryza rufipogon] (115) | | | | | | | |---------- ORGLA03G0252400.1 [Oryza glaberrima] (180) | | /-100+ | | | | | \---------- LOC_Os03g43840.1 [Oryza sativa japonica] (111) | | | | | | | |--------------- KN538706.1_FGP032 [Oryza longistaminata] (45) | | /-86-+ | | | | | \--------------- OGLUM03G27760.1 [Oryza glumaepatula] (116) | | | | | |-100+ \-------------------- LPERR03G22460.1 [Leersia perrieri] (93) | | | | | \------------------------- OB03G34920.1 [Oryza brachyantha] (57) | | | \------------------------------ PH01001389G0360 [Phyllostachys heterocycla] (89) | | /----- Do019374.1 [Dichanthelium oligosanthes] (7) | | | /-79-+----- Pahal.I02465.1 [Panicum hallii] (17) | | | | | \----- Pavir.9NG189700.1.p [Panicum virgatum] (54) | | | /-100+ /----- Sevir.9G158300.1.p [Setaria viridis] (23) | | |-100+ | | | \----- Seita.9G159900.1.p [Setaria italica] (98) | | | \---------------------100---------------------+ \---------- Pavir.9KG075900.1.p [Panicum virgatum] (37) | | /----- Sobic.001G158500.1.p [Sorghum bicolor] (59) \---100---+ \----- GRMZM2G173425_P01 [Zea mays] (75) Root part of tree: /------------------------------------------------------------------ Oropetium_20150105_08384A [Oropetium thomaeum] (1) | | /-------------------------------------------- (185) | | |---------100---------+ /---------------------- 462874299 [Eragrostis tef] (19) + \---------100---------+ | \---------------------- 462894244 [Eragrostis tef] (78) | | /-------------------------------------------- Zpz_sc00018.1.g00560.1.am.mkhc [Zoysia pacifica] (34) | | \----------74---------+ /---------------------- Zmw_sc01739.1.g00060.1 [Zoysia matrella] (84) \----------97---------+ \---------------------- Zjn_sc00019.1.g02830.1.sm.mkhc [Zoysia japonica] (95) |