PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP1039
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Subtree rooted at node 243: /----- PDK_30s934551g004 [Phoenix dactylifera] (2) /---100---+ | \----- XP_010937273.1 [Elaeis guineensis] (68) | /-100+ /----- PDK_30s1111671g005 [Phoenix dactylifera] (56) | | /-100+ | | | \----- XP_010939857.1 [Elaeis guineensis] (67) | \-100+ | | /----- PDK_30s934551g005 [Phoenix dactylifera] (66) | \-99-+ /-70-+ \----- XP_010937274.1 [Elaeis guineensis] (113) | | | | /----- Aco009511.1 [Ananas comosus] (38) | | /----80---+ | | | \----- Aco003993.1 [Ananas comosus] (87) | | | | \-53-+ /---------- GSMUA_Achr6P10870_001 [Musa acuminata] (44) | | | /-54-+ \-93-+ /----- GSMUA_AchrUn_randomP19380_001 [Musa acuminata] (85) | | \-100+ | | \----- GSMUA_Achr2P07300_001 [Musa acuminata] (112) | | | | /----- PEQU_14820 [Phalaenopsis equestris] (26) | | /-96-+ | | | \----- PEQU_12246 [Phalaenopsis equestris] (48) | \------92------+ | \---------- PEQU_14447 [Phalaenopsis equestris] (42) | | /----- PDK_30s861471g001 [Phoenix dactylifera] (3) | /-100+ /--67-+ | \----- XP_010917392.1 [Elaeis guineensis] (59) | | /-100+ | | | | /----- PDK_30s846061g001 [Phoenix dactylifera] (5) | | | \-100+ | | | \----- XP_010932347.1 [Elaeis guineensis] (118) | | | | | | /----- GSMUA_Achr8P23730_001 [Musa acuminata] (12) | | |----97---+ | | | \----- GSMUA_Achr3P05800_001 [Musa acuminata] (18) | | | | | |--------------- GSMUA_Achr7P19800_001 [Musa acuminata] (27) | \------64------+ | |--------------- Aco012157.1 [Ananas comosus] (34) /-66-+ | | | | /---------- GSMUA_Achr5P24060_001 [Musa acuminata] (57) | | | | | | |-93-+ /----- GSMUA_Achr9P18090_001 [Musa acuminata] (93) | | | \-77-+ | | | \----- GSMUA_Achr3P10140_001 [Musa acuminata] (125) | | | | | \--------------- Aco021063.1 [Ananas comosus] (122) /-86-+ | | | |------------------------------------ Spipo0G0034200 [Spirodela polyrhiza] (28) | | | | | | /----- Zosma189g00120.1 [Zostera marina] (76) | | \--------------73--------------+ | | \----- Zosma81g00960.1 [Zostera marina] (95) | | | \----------------------------------------- LPERR10G05960.1 [Leersia perrieri] (98) | | /------------------------------ OPUNC06G05780.1 [Oryza punctata] (8) | | | | /--------------- OGLUM06G06300.1 [Oryza glumaepatula] (31) | | | | | |--------------- OBART06G06020.1 [Oryza barthii] (45) | | | | | /-100+ /---------- LOC_Os06g09390.1 [Oryza sativa japonica] (50) | /-100-+ | | | | | | | | | /----- BGIOSGA022463-PA [Oryza sativa indica] (82) | | | | \-100+-100+ | | | /-97-+ | \----- ONIVA06G06990.1 [Oryza nivara] (100) | | | | | | | | | | | \---------- ORUFI06G06250.1 [Oryza rufipogon] (133) /-84-+ /-100+ \-100+ | | | | | | \-------------------- KN540122.1_FGP002 [Oryza longistaminata] (84) | | | | | | | | | \------------------------- OMERI06G07210.1 [Oryza meridionalis] (92) | | | | | | | | /----- OB06G15590.1 [Oryza brachyantha] (29) | | | \--------------99--------------+ | | | \----- LPERR06G05580.1 [Leersia perrieri] (69) | | | | | | /----- Seita.2G080100.1.p [Setaria italica] (13) | | | /-100+ | | | | \----- Sevir.2G082700.1.p [Setaria viridis] (121) | | | /-93-+ | | | | | /----- Sevir.2G082500.1.p [Setaria viridis] (131) | | | | \-100+ | | | /-92-+ \----- Seita.2G079900.1.p [Setaria italica] (134) | | | | | | | | | | /----- Sevir.4G039400.1.p [Setaria viridis] (46) | | | | \---100---+ | | | | \----- Seita.4G041600.1.p [Setaria italica] (128) | | | | | | | /-89-+ /----- Pavir.4KG096000.1.p [Panicum virgatum] (14) | \-93-+ | | /-100+ | | | | | \----- Pavir.4NG071300.1.p [Panicum virgatum] (94) | | | | /-100+ | | | | | \---------- Pahal.F02429.1 [Panicum hallii] (16) | | /-90-+ \-71-+ | | | | \--------------- Do016453.1 [Dichanthelium oligosanthes] (37) | | | | | | | | /----- Sobic.010G071700.1.p [Sorghum bicolor] (61) | | | \--------100--------+ | | | \----- GRMZM2G171179_P01 [Zea mays] (132) | | | | | /--89-+ /----- 462891596 [Eragrostis tef] (24) | | | | /-100+ | | | | | \----- 462913803 [Eragrostis tef] (99) | | | | /-99-+ | | | | | | /----- Zjn_sc00004.1.g01350.1.cf.mkhc [Zoysia japonica] (71) | | | | | \-99-+ | | | \------51------+ \----- Oropetium_20150105_17251A [Oropetium thomaeum] (78) | | | | | | | \--------------- Pavir.9NG193100.1.p [Panicum virgatum] (129) | | | | | | /---------- Traes_7DS_3570A0055.2 [Triticum aestivum] (39) | \-71-+ | | | | /----- EMT07419 [Aegilops tauschii] (43) | | /-100+-89-+ | | | | \----- TRIUR3_28474-P1 [Triticum urartu] (80) | | | | | | /-100+ \---------- EMT19548 [Aegilops tauschii] (77) | | | | /-93-+ | | \--------------- MLOC_18529.2 [Hordeum vulgare] (54) | | | /-100+ | | | | | /----- Bradi1g46690.3.p [Brachypodium distachyon] (111) | | | | \------100-----+ | | \----74----+ \----- Brast07G063700.1.p [Brachypodium stacei] (114) | | | | | | /----- PH01001102G0050 [Phyllostachys heterocycla] (140) | | \---------68--------+ | | \----- PH01000014G0360 [Phyllostachys heterocycla] (170) | | | | /----- Zpz_sc00393.1.g00090.1.am.mkhc [Zoysia pacifica] (6) | | /-76-+ | | | \----- Zmw_sc00994.1.g00110.1 [Zoysia matrella] (130) | | | | | /-100+---------- Zjn_sc00007.1.g02710.1.am.mkhc [Zoysia japonica] (32) | | | | | | | \---------- Zmw_sc05221.1.g00070.1 [Zoysia matrella] (90) | | | | | /-89-+ /----- Zjn_sc00066.1.g02580.1.sm.mkhc [Zoysia japonica] (41) | | | | /-100+ | | | | | \----- Zmw_sc03453.1.g00080.1 [Zoysia matrella] (47) | | /-98-+ \-100+ | | | | \---------- Zpz_sc00069.1.g00100.1.sm.mkhc [Zoysia pacifica] (55) | | | | | | /-100+ \-------------------- Oropetium_20150105_04419A [Oropetium thomaeum] (127) | | | | | | | \------------------------- 462886298 [Eragrostis tef] (96) | | | | | | /---------- GRMZM2G018398_P01 [Zea mays] (11) | | | | | | /-------98------+ /------100-----+ /----- GRMZM2G110333_P01 [Zea mays] (63) | | | | | \-83-+ | | | | | \----- Sobic.004G321300.1.p [Sorghum bicolor] (115) | | | | | | | | | | /----- Sevir.1G349700.1.p [Setaria viridis] (49) | | | | | /---100---+ | | | \-100+ | \----- Seita.1G342700.1.p [Setaria italica] (120) | | | | | | | | | /-100+ /----- Pavir.1NG521800.1.p [Panicum virgatum] (72) | | | | | | /-58-+ | | | | | | | \----- Pahal.A03603.1 [Panicum hallii] (110) | | | \-100+ \-100+ | | | | \---------- Pavir.2NG467400.1.p [Panicum virgatum] (83) | | | | | | | \-------------------- Do017846.1 [Dichanthelium oligosanthes] (160) | | | | | | /----- BGIOSGA005480-PA [Oryza sativa indica] (9) | | | /-75-+ | | | | \----- ONIVA02G37060.1 [Oryza nivara] (22) | | | | | | | |---------- ORUFI02G36450.1 [Oryza rufipogon] (51) | \-67-+ | | | |---------- LOC_Os02g54160.1 [Oryza sativa japonica] (65) | | | /-53-+ | /-90-+---------- OBART02G34990.1 [Oryza barthii] (81) | | | | | | | | | |---------- OGLUM02G36100.1 [Oryza glumaepatula] (86) | | | | | | | | /-99-+ |---------- KN538868.1_FGP011 [Oryza longistaminata] (180) | | | | | | | | | | | \---------- ORGLA02G0302700.1 [Oryza glaberrima] (119) | | | /-99-+ | | | | | | \--------------- OMERI02G32980.1 [Oryza meridionalis] (91) | | | | | | | | /-99-+ \-------------------- OPUNC02G32270.1 [Oryza punctata] (30) | | | | | | | | /--99-+ \------------------------- OB02G41790.1 [Oryza brachyantha] (17) | | | | | | | | | \------------------------------ LPERR02G28780.1 [Leersia perrieri] (120) | | | /-59-+ | | | | | /----- Brast04G007700.1.p [Brachypodium stacei] (52) | | | | \--------------100-------------+ | | \-73-+ \----- Bradi3g60120.3.p [Brachypodium distachyon] (73) | | | | | | /----- PH01000210G1070 [Phyllostachys heterocycla] (110) | | \----------------100----------------+ | | \----- PH01003506G0180 [Phyllostachys heterocycla] (124) | | | | /----- EMT18835 [Aegilops tauschii] (4) | | /------100-----+ | | | \----- TRIUR3_28710-P1 [Triticum urartu] (70) | | | | | /-99-+ /--------------- TRIUR3_27452-P1 [Triticum urartu] (15) | | | | | | | | | | /----- EMT16905 [Aegilops tauschii] (21) | | | \-99-+ /-99-+ | | | | | \----- Traes_6AS_A9D28899F.1 [Triticum aestivum] (97) | |--------------79--------------+ \-99-+ | | | | /----- Traes_6BS_2291F7F98.1 [Triticum aestivum] (58) --83-+ | | \-94-+ | | | \----- EMT10156 [Aegilops tauschii] (126) | | | | | \------------------------- MLOC_69925.2 [Hordeum vulgare] (150) | | | | /----- TRIUR3_08978-P1 [Triticum urartu] (7) | | /-100+ | | | \----- Traes_6AL_DAA2D7F8A.1 [Triticum aestivum] (20) | | | | | | /----- EMT10240 [Aegilops tauschii] (10) | |---------------------100---------------------+-100+ | | | \----- Traes_6DL_DD82BD107.2 [Triticum aestivum] (79) | | | | | \---------- Traes_6BL_6AEADC565.2 [Triticum aestivum] (60) | | | | /----- EMT17811 [Aegilops tauschii] (40) | | /-99-+ | | | \----- EMT16418 [Aegilops tauschii] (75) | \---------------------100---------------------+ | | /----- MLOC_59004.1 [Hordeum vulgare] (64) | \-100+ | \----- MLOC_58276.1 [Hordeum vulgare] (74) | | /----- MLOC_77669.3 [Hordeum vulgare] (25) | /-66-+ | | \----- MLOC_78827.1 [Hordeum vulgare] (36) | /-100+ | | \---------- MLOC_1697.2 [Hordeum vulgare] (33) | /-100+ | | \--------------- MLOC_10017.3 [Hordeum vulgare] (190) | | | /-88-+ /----- TRIUR3_22061-P1 [Triticum urartu] (53) | | | | | | \------100-----+----- Traes_6BL_A8D141E69.1 [Triticum aestivum] (88) | | | \----------------100----------------+ \----- EMT14510 [Aegilops tauschii] (116) | | /----- EMT32411 [Aegilops tauschii] (89) \--------100--------+ \----- Traes_6AL_3C182DED5.1 [Triticum aestivum] (117) Root part of tree: /------------------------------------------------------------------ EMT05935 [Aegilops tauschii] (1) | | /---------------------- TRIUR3_34422-P1 [Triticum urartu] (19) | /---------100---------+ | | \---------------------- TRIUR3_33298-P1 [Triticum urartu] (130) +---------100---------+ | \-------------------------------------------- EMT29111 [Aegilops tauschii] (62) | | /-------------------------------------------- (243) | | \----------62---------+ /---------------------- MLOC_3298.1 [Hordeum vulgare] (23) | | \---------100---------+---------------------- MLOC_80875.1 [Hordeum vulgare] (35) | \---------------------- MLOC_8430.1 [Hordeum vulgare] (123) |