PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM6424
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Subtree rooted at node 72: /----- RrC17549_p1 [Raphanus raphanistrum] (2) /-100+ | \----- Rsa1.0_00490.1_g00020.1 [Raphanus sativus] (25) /-97-+ | \---------- XP_013634398.1 [Brassica oleracea] (35) /------------99-----------+ | | /----- GSBRNA2T00007134001 [Brassica napus] (17) | \---100---+ | \----- XP_009141595.1 [Brassica rapa] (42) | | /-------------------------- Thhalv10017537m [Eutrema salsugineum] (4) | | | | /----- Carubv10024954m [Capsella rubella] (10) | | /-100+ | | | \----- Cagra.0228s0035.1.p [Capsella grandiflora] (13) | | /-68-+ | /-57-+ | \---------- Csa05g017590.1 [Camelina sativa] (20) | | | | | | | | /----- Csa06g039080.1 [Camelina sativa] (11) | | | /--95-+---100---+ /-100+ | | | | \----- Csa04g049950.1 [Camelina sativa] (36) | | | | | | | | /-81-+ \-100+ \--------------- Bostr.23794s0446.1.p [Boechera stricta] (39) | | | | | | | | | | /----- 902763 [Arabidopsis lyrata] (31) | | | | \------100------+ | | | | \----- AT2G36450.1 [Arabidopsis thaliana] (43) | | | | | | | \------------------------------- Tp4g18750 [Thellungiella parvula] (30) | | | | | | /----- Rsa1.0_02649.1_g00002.1 [Raphanus sativus] (5) | | | /---100---+ | | | | \----- RrC2488_p1 [Raphanus raphanistrum] (21) | | | | | | | | /----- GSBRNA2T00098205001 [Brassica napus] (7) | \-53-+---------100--------+ /-100+ /-100-+ | | | \----- XP_009133086.1 [Brassica rapa] (28) | | | | | | | | \-100+---------- XP_013627885.1 [Brassica oleracea] (19) | | | | | | | \---------- GSBRNA2T00132481001 [Brassica napus] (40) | | | | | | /----- RrC1_p3 [Raphanus raphanistrum] (8) | | | /-100+ | | | | \----- Rsa1.0_01729.1_g00005.1 [Raphanus sativus] (23) /-51-+ | | /-100+ | | | | | | /----- GSBRNA2T00141126001 [Brassica napus] (16) | | | | | \-100+ | | | \---------57---------+ \----- XP_013635223.1 [Brassica oleracea] (41) | | | | | | | \--------------- 676787974 [Sisymbrium irio] (45) /-100+ | | | | | \---------------------------------------------- AA60G00147 [Aethionema arabicum] (22) | | | | | \---------------------------------------------------- XP_010554937.1 [Tarenaya hassleriana] (37) --78-+ | | \--------------------------------------------------------- XP_010554873.1 [Tarenaya hassleriana] (33) | | /----- evm.model.supercontig_5.71 [Carica papaya] (24) \---------------------------58---------------------------+ \----- Eucgr.K02071.1.p [Eucalyptus grandis] (46) Root part of tree: /------------------------------------------------------------------- Ciclev10012757m [Citrus clementina] (1) | |------------------------------------------------------------------- orange1.1g039696m [Citrus sinensis] (27) | | /-------------------------------------------------- (72) | | | | /-------- Cotton_A_36210_BGI-A2_v1.0 [Gossypium arboreum] (3) | | /---100--+ | | | \-------- Gh_A01G1151 [Gossypium hirsutum] (14) | | /-----------100----------+ + /---93---+ | \----------------- Gorai.002G159400.1 [Gossypium raimondii] (9) | | | | | | | | /------------------------- Thecc1EG022462t1 [Theobroma cacao] (6) | | | | | | | | | | /-------- Gh_A04G0545 [Gossypium hirsutum] (18) | | \---68--+ /---99--+ /---82---+ | | | | | | \-------- Cotton_A_10375_BGI-A2_v1.0 [Gossypium arboreum] (44) | | | | \--100--+ | | | | | /-------- Gorai.009G407200.1 [Gossypium raimondii] (26) | | | | \---97---+ \--100--+ | | \-------- Gh_D04G1005 [Gossypium hirsutum] (32) | \---63---+ | | /-------- Cotton_A_00525_BGI-A2_v1.0 [Gossypium arboreum] (12) | | /---100--+ | | | \-------- Gh_A01G1783 [Gossypium hirsutum] (38) | | /---75--+ | | | \----------------- Gorai.002G241800.1 [Gossypium raimondii] (34) | \--100--+ | \------------------------- Gh_D01G2024 [Gossypium hirsutum] (29) | \----------------------------------------------------------- Neem_8170_f_1 [Azadirachta indica] (15) |