PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM565
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/------------------------------------------------------------------ Csa20g026260.1 [Camelina sativa] (1) | |------------------------------------------------------------------ Csa13g020860.1 [Camelina sativa] (83) | | /------- Rsa1.0_03463.1_g00002.1 [Raphanus sativus] (2) | /------------95-----------+ | | \------- RrC18698_p2 [Raphanus raphanistrum] (170) | | | |--------------------------------- Tp4g26250 [Thellungiella parvula] (3) | | | | /------- Csa08g054880.1 [Camelina sativa] (4) | | | | | |------- Csa05g033460.1 [Camelina sativa] (5) | |------------80-----------+ | | |------- Csa20g012960.1 [Camelina sativa] (10) | | | | | \------- Csa13g011450.1 [Camelina sativa] (74) | | | |--------------------------------- Csa15g023050.1 [Camelina sativa] (6) | | | | /------- GSBRNA2T00143116001 [Brassica napus] (8) | | /--91-+ | | | \------- XP_009126227.1 [Brassica rapa] (15) | | /--84--+ | | | \------------- GSBRNA2T00114798001 [Brassica napus] (134) | | /--78-+ | | | \-------------------- Rsa1.0_05139.1_g00003.1 [Raphanus sativus] (140) | |--61--+ | | \-------------------------- 676789704 [Sisymbrium irio] (91) | | | | /------------- 480792 [Arabidopsis lyrata] (9) | | | | | /--78--+ /------- 900280 [Arabidopsis lyrata] (95) | | | \--82-+ | | /--88-+ \------- Araha.11972s0001.1.p [Arabidopsis halleri] (100) | | | | | | | \-------------------- AT2G16210.1 [Arabidopsis thaliana] (55) | | | | |--57--+ /------- Csa15g071540.1 [Camelina sativa] (40) | | | /-100-+ | | | | \------- Csa19g046640.1 [Camelina sativa] (110) | | \-----95-----+ | | \------------- Bostr.18351s0037.1.p [Boechera stricta] (117) | | | |--------------------------------- Bostr.18351s0038.1.p [Boechera stricta] (11) | | | | /------- Rsa1.0_03623.1_g00003.1 [Raphanus sativus] (12) | | /-100-+ | | | \------- RrC8372_p1 [Raphanus raphanistrum] (94) | | | | | |------------- GSBRNA2T00015108001 [Brassica napus] (63) | | | | |---------80--------+ /------- XP_013603574.1 [Brassica oleracea] (71) | | |--93-+ | | | \------- GSBRNA2T00012788001 [Brassica napus] (127) | | | | | \------------- XP_013601433.1 [Brassica oleracea] (180) | | | |--------------------------------- KFK37232.1 [Arabis alpina] (13) | | | |--------------------------------- Csa15g071570.1 [Camelina sativa] (14) | | | | /------------- 330738 [Arabidopsis lyrata] (16) | | | | | | /------- Cagra.1085s0083.1.p [Capsella grandiflora] (64) | |---------56--------+-100-+ | | | \------- Carubv10001579m [Capsella rubella] (77) | | | | | \------------- Thhalv10014143m [Eutrema salsugineum] (111) | | | | /-------------------- Csa19g050380.1 [Camelina sativa] (17) | | | | | | /------- Cagra.21772s0001.1.p [Capsella grandiflora] (81) | |-----62-----+ /-100-+ | | | | \------- Carubv10015496m [Capsella rubella] (118) | | \--100-+ | | \------------- Csa01g035150.1 [Camelina sativa] (96) | | | | /------- RrC1635_p5 [Raphanus raphanistrum] (18) | | /-----100----+ | | | \------- Rsa1.0_01104.1_g00012.1 [Raphanus sativus] (132) | | | | |-----60-----+ /------------- GSBRNA2T00137507001 [Brassica napus] (21) | | | | | | | | /------- GSBRNA2T00123899001 [Brassica napus] (50) | | \--86--+-100-+ | | | \------- XP_013626721.1 [Brassica oleracea] (190) | | | | | \------------- XP_009135510.1 [Brassica rapa] (70) | | | | /------------- XP_009135509.1 [Brassica rapa] (19) | | | | | /--98--+ /------- GSBRNA2T00123900001 [Brassica napus] (22) | | | \-100-+ | | /-100-+ \------- XP_013626977.1 [Brassica oleracea] (33) | | | | | | | \-------------------- GSBRNA2T00137506001 [Brassica napus] (75) | |--97--+ | | | /------- Rsa1.0_01104.1_g00013.1 [Raphanus sativus] (85) | | \--------100-------+ | | \------- RrC1635_p6 [Raphanus raphanistrum] (125) | | | |--------------------------------- Thhalv10015617m [Eutrema salsugineum] (20) | | | |--------------------------------- GSBRNA2T00076988001 [Brassica napus] (24) | | | |--------------------------------- Araha.2952s0002.1.p [Arabidopsis halleri] (25) | | | | /------- Csa19g023950.1 [Camelina sativa] (26) | |------------97-----------+ | | \------- Csa01g019700.1 [Camelina sativa] (82) | | | |--------------------------------- KFK40028.1 [Arabis alpina] (27) | | | | /------- Carubv10015789m [Capsella rubella] (29) | |-----------100-----------+ | | \------- Cagra.4396s0008.1.p [Capsella grandiflora] (58) | | | |--------------------------------- Bostr.13129s0015.1.p [Boechera stricta] (30) | | | |--------------------------------- Tp6g26290 [Thellungiella parvula] (31) | | | | /------- XP_009141415.1 [Brassica rapa] (32) | |------------55-----------+ | | \------- GSBRNA2T00042488001 [Brassica napus] (110) | | | | /------- GSBRNA2T00022030001 [Brassica napus] (34) | | /--89-+ | | | \------- XP_013635836.1 [Brassica oleracea] (80) + /--100-+ /--83--+ | | | | | /------- GSBRNA2T00045162001 [Brassica napus] (48) | | | | \--92-+ | | |-----59-----+ \------- XP_009142249.1 [Brassica rapa] (62) | | | | | | | | /------- RrC16212_p2 [Raphanus raphanistrum] (54) | | | \-----96-----+ | | | \------- Rsa1.0_00910.1_g00013.1 [Raphanus sativus] (89) | | | | | |--------------------------------- Thecc1EG006973t1 [Theobroma cacao] (35) | | | | | |--------------------------------- 488674 [Arabidopsis lyrata] (36) | | | | | | /------- Tp6g26220 [Thellungiella parvula] (37) | | | /--62-+ | | | | \------- 676789528 [Sisymbrium irio] (97) | | |---------65--------+ | | | \------------- KFK26025.1 [Arabis alpina] (59) | | | | | | /------- Araha.7254s0007.1.p [Arabidopsis halleri] (38) | | |-----------100-----------+ | | | \------- 318465 [Arabidopsis lyrata] (120) | | | | | |--------------------------------- Tp3g15230 [Thellungiella parvula] (39) | | | | | |--------------------------------- AA40G00302 [Aethionema arabicum] (41) | | | | | |--------------------------------- XP_013614125.1 [Brassica oleracea] (42) | | | | | |--------------------------------- Araha.4808s0002.1.p [Arabidopsis halleri] (43) | | | | | | /------- 861370 [Arabidopsis lyrata] (44) | | | /--97-+ | | | | \------- Araha.4815s0004.1.p [Arabidopsis halleri] (88) | | |---------51--------+ | | | \------------- AT5G09780.1 [Arabidopsis thaliana] (57) | | | | | | /------- Csa08g010530.1 [Camelina sativa] (45) | | | /--63-+ | | | | \------- Csa13g020980.1 [Camelina sativa] (87) | | | /--100-+ | | | | \------------- Csa20g026430.1 [Camelina sativa] (128) | | | | | | |-----60-----+-------------------- Bostr.26527s0401.1.p [Boechera stricta] (68) | | | | | | | \-------------------- AT5G18090.1 [Arabidopsis thaliana] (120) | | | | | | /------- Tp1g09320 [Thellungiella parvula] (47) | | |------------73-----------+ | | | \------- 676723382 [Sisymbrium irio] (86) | | | | | |--------------------------------- Csa10g028680.1 [Camelina sativa] (49) | | | | | |--------------------------------- GSBRNA2T00014034001 [Brassica napus] (51) | | | | | |--------------------------------- XP_010548045.1 [Tarenaya hassleriana] (52) | | | | | | /-------------------- AT2G35310.1 [Arabidopsis thaliana] (53) | | | | | | | | /------- 482495 [Arabidopsis lyrata] (60) | | | /--64-+ /-100-+ | | | | | | \------- 497432 [Arabidopsis lyrata] (150) | | | | \--100-+ | | |--58--+ \------------- Araha.7846s0004.1.p [Arabidopsis halleri] (84) | | | | | | | \-------------------------- Bostr.23794s0571.1.p [Boechera stricta] (93) | /--59-+ | | | | |--------------------------------- GSBRNA2T00153798001 [Brassica napus] (56) | | | | | | | | /------- GSBRNA2T00032675001 [Brassica napus] (61) | | | |------------97-----------+ | | | | \------- XP_013610026.1 [Brassica oleracea] (119) | | | | | | | | /------- Carubv10003677m [Capsella rubella] (65) | | | |-----------100-----------+ | | | | \------- Cagra.0906s0005.1.p [Capsella grandiflora] (76) | | | | | | | |--------------------------------- Csa07g037100.1 [Camelina sativa] (66) | | | | | | | |--------------------------------- Thhalv10022138m [Eutrema salsugineum] (67) | | | | | | | | /------- Rsa1.0_04353.1_g00002.1 [Raphanus sativus] (69) | | | |------------78-----------+ | | | | \------- RrC401_p4 [Raphanus raphanistrum] (90) | | | | | | | |--------------------------------- AT3G17010.1 [Arabidopsis thaliana] (72) | | | | | | | |--------------------------------- Bostr.19424s0967.1.p [Boechera stricta] (73) | | | | | | | |--------------------------------- GSBRNA2T00101881001 [Brassica napus] (78) | | | | | | | | /------- Ciclev10029372m [Citrus clementina] (79) | | | | /-100-+ | | | | | \------- orange1.1g045031m [Citrus sinensis] (112) | | | |---------56--------+ | | | | \------------- 874794 [Arabidopsis lyrata] (124) | | | | | | | | /------- XP_009121019.1 [Brassica rapa] (92) | | | |-----------100-----------+ | | | | \------- GSBRNA2T00065932001 [Brassica napus] (122) | /--91--+ | | | | | | |--------------------------------- Csa11g032870.1 [Camelina sativa] (99) | | | | | | | | | |--------------------------------- Araha.8689s0001.1.p [Arabidopsis halleri] (130) | | | | | | | | | |--------------------------------- XP_009146048.1 [Brassica rapa] (113) | | | | | | | | | |--------------------------------- XP_013585073.1 [Brassica oleracea] (114) | | | | | | | | | |--------------------------------- XP_013631897.1 [Brassica oleracea] (115) | | | | | | | | | |--------------------------------- Thhalv10015705m [Eutrema salsugineum] (116) | | | | | | | | | |--------------------------------- Bostr.27895s0113.1.p [Boechera stricta] (121) | | | | | | | | | |--------------------------------- Thhalv10023054m [Eutrema salsugineum] (126) | | | | | | | | | |--------------------------------- AA123G00069 [Aethionema arabicum] (130) | | | | | | /-100-+ | | |--------------------------------- Thhalv10022780m [Eutrema salsugineum] (131) | | | | | | | | | | | |--------------------------------- KFK39039.1 [Arabis alpina] (133) | | | | | | | | | | | \--------------------------------- Thhalv10001785m [Eutrema salsugineum] (135) | | | | | | | | | | /------- 350906 [Arabidopsis lyrata] (23) | | | | | /-100-+ | | | | | | \------- Araha.69440s0001.1.p [Arabidopsis halleri] (98) | | | | |------------93------------+ \--100-+ | | | \------------- AT5G18000.1 [Arabidopsis thaliana] (129) | | | | | | | \---------------------------------------- Bostr.26527s0412.1.p [Boechera stricta] (160) | | | | | | /------- Carubv10002417m [Capsella rubella] (28) | | \------------------100-----------------+ | | \------- Cagra.6254s0043.1.p [Capsella grandiflora] (123) | | | \----------------------------------------------------- Csa08g029800.1 [Camelina sativa] (7) | \----------------------------------------------------------- Csa08g010360.1 [Camelina sativa] (46) |