PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM478
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 217: /----- Gh_D07G0513 [Gossypium hirsutum] (2) /-78-+ | \----- Gh_A07G0449 [Gossypium hirsutum] (75) /-94-+ | \---------- Cotton_A_19936_BGI-A2_v1.0 [Gossypium arboreum] (60) /-------------------100------------------+ | \--------------- Gorai.001G058500.1 [Gossypium raimondii] (37) | | /------------------------- AT3G48590.1 [Arabidopsis thaliana] (3) | | | | /--------------- Bostr.18473s0090.1.p [Boechera stricta] (25) | | | | | | /----- Cagra.0134s0008.1.p [Capsella grandiflora] (34) |--------------96--------------+ /-93-+ /-100+ | | | | | \----- Carubv10017963m [Capsella rubella] (53) | | | \-99-+ | | | | /----- Csa06g022400.1 [Camelina sativa] (116) | \-63-+ \-100+ | | \----- Csa04g033740.1 [Camelina sativa] (158) | | | | /----- 485217 [Arabidopsis lyrata] (89) | \------78------+ | \----- Araha.0028s0010.1.p [Arabidopsis halleri] (111) | | /----- Csa11g100410.1 [Camelina sativa] (4) | /-97-+ | | \----- Csa18g037000.1 [Camelina sativa] (71) | /-98-+ | | \---------- Csa02g072080.1 [Camelina sativa] (141) | /-99-+ | | | /----- Cagra.0248s0024.1.p [Capsella grandiflora] (142) | | \---100---+ | /-97-+ \----- Carubv10028272m [Capsella rubella] (150) | | | | | \-------------------- Bostr.0568s0464.1.p [Boechera stricta] (91) | /-95-+ | | | /----- 496533 [Arabidopsis lyrata] (27) | | \---------66--------+ | /--72-+ \----- AT5G63470.1 [Arabidopsis thaliana] (110) | | | | | \------------------------------ Thhalv10004831m [Eutrema salsugineum] (78) | | | | /---------- GSBRNA2T00055534001 [Brassica napus] (10) | | | | | /-67-+ /----- XP_013622364.1 [Brassica oleracea] (19) | /-58-+ | \-100+ | | | /-97-+ \----- GSBRNA2T00141624001 [Brassica napus] (123) | | | | | | | | | \--------------- XP_009150400.1 [Brassica rapa] (12) | | | /-83-+ | | | | | /----- Rsa1.0_02592.1_g00001.1 [Raphanus sativus] (114) | /-56-+ | | \------100-----+ | | | \----74----+ \----- RrC9847_p1 [Raphanus raphanistrum] (126) | | | | | | | \------------------------- 676739372 [Sisymbrium irio] (32) | | | | /-55-+ \----------------------------------------- Tp2g26550 [Thellungiella parvula] (155) | | | | | | /----- XP_013609413.1 [Brassica oleracea] (72) | | | /-100+ /-89-+-64-+ | | \----- GSBRNA2T00088944001 [Brassica napus] (112) | | | \-----------------99----------------+ | | | \---------- KFK28057.1 [Arabis alpina] (160) | | | | | \--------------------------------------------------- AA4G00077 [Aethionema arabicum] (131) | | | |-------------------------------------------------------- Gh_Sca145821G01 [Gossypium hirsutum] (6) | | | |-------------------------------------------------------- Rsa1.0_18395.1_g00001.1 [Raphanus sativus] (11) | | | |-------------------------------------------------------- XP_010545948.1 [Tarenaya hassleriana] (16) | | | | /----- XP_009149806.1 [Brassica rapa] (21) | | /-100+ | | | \----- GSBRNA2T00125355001 [Brassica napus] (128) | | | | |----------------------98---------------------+---------- GSBRNA2T00121648001 [Brassica napus] (40) | | | | | \---------- XP_013600104.1 [Brassica oleracea] (149) | | | | /--------------- Cotton_A_08040_BGI-A2_v1.0 [Gossypium arboreum] (24) | | | | | | /----- Gorai.008G206700.1 [Gossypium raimondii] (83) | |-------------------91-------------------+ /-88-+ | | | | \----- Gh_D12G1881 [Gossypium hirsutum] (134) | | \-97-+ | | \---------- Gh_A12G1722 [Gossypium hirsutum] (86) | | | |-------------------------------------------------------- Thhalv10010679m [Eutrema salsugineum] (43) | | | | /----- Ciclev10032641m [Citrus clementina] (51) | | /-100+ | | | \----- orange1.1g026901m [Citrus sinensis] (85) | | /-99-+ | | | \---------- Neem_7271_f_1 [Azadirachta indica] (130) | |-------------------57-------------------+ --93-+ | \--------------- evm.model.supercontig_13.107 [Carica papaya] (190) | | | |-------------------------------------------------------- RrC11981_p1 [Raphanus raphanistrum] (61) | | | |-------------------------------------------------------- Eucgr.K02714.1.p [Eucalyptus grandis] (84) | | | |-------------------------------------------------------- KFK34168.1 [Arabis alpina] (97) | | | |-------------------------------------------------------- Thecc1EG014651t1 [Theobroma cacao] (120) | | | |-------------------------------------------------------- AA96G00120 [Aethionema arabicum] (110) | | | | /----- XP_010519511.1 [Tarenaya hassleriana] (122) | |------------------------100-----------------------+ | | \----- XP_010550738.1 [Tarenaya hassleriana] (140) | | | |-------------------------------------------------------- Tp5g13380 [Thellungiella parvula] (125) | | | \-------------------------------------------------------- Eucgr.B00106.1.p [Eucalyptus grandis] (139) | | /----- Csa11g081940.1 [Camelina sativa] (44) | /-93-+ | | \----- Csa18g021260.1 [Camelina sativa] (68) | /-100+ | | \---------- Csa02g039160.1 [Camelina sativa] (136) | | | /-100+ /----- AT5G50480.1 [Arabidopsis thaliana] (99) | | | /-100+ | | | | \----- 495114 [Arabidopsis lyrata] (147) | /----78---+ \-50-+ | | | \---------- Bostr.15774s0198.1.p [Boechera stricta] (180) | | | | | \-------------------- KFK26697.1 [Arabis alpina] (69) | | | | /-------------------- Tp6g12670 [Thellungiella parvula] (56) \--------------95--------------+ | | | /----- 676704342 [Sisymbrium irio] (66) | | /-98-+ | /-93-+ | \----- 676707934 [Sisymbrium irio] (148) | | | /-98-+ | | | | \---------- 676760230 [Sisymbrium irio] (124) \-90-+ \-82-+ | \--------------- Rsa1.0_00924.1_g00002.1 [Raphanus sativus] (82) | \------------------------- Thhalv10015323m [Eutrema salsugineum] (146) Root part of tree: /------------------------------------------------------------------ KFK35610.1 [Arabis alpina] (1) | | /----- AT1G54830.1 [Arabidopsis thaliana] (22) | /-100+ | | \----- 474760 [Arabidopsis lyrata] (29) | | | |---------- Cagra.0445s0002.1.p [Capsella grandiflora] (67) | /-55-+ | | |---------- Bostr.13404s0057.1.p [Boechera stricta] (119) | | | | | \---------- Carubv10020932m [Capsella rubella] (156) |------------------------99------------------------+ | | /----- Csa05g060700.1 [Camelina sativa] (55) | | /-100+ | | | \----- Csa17g098200.1 [Camelina sativa] (160) | \-100+ | \---------- Csa07g023720.1 [Camelina sativa] (113) | | /--------------------------------------------------- (217) | | | | /----- Neem_8468_f_2 [Azadirachta indica] (5) | | /-----------100----------+ | | | \----- Neem_20541_f_1 [Azadirachta indica] (100) | | | | | | /----- Gh_A01G0796 [Gossypium hirsutum] (14) | | | /-100+ | | | | \----- Cotton_A_12715_BGI-A2_v1.0 [Gossypium arboreum] (17) | | | /-100+ | | | | | /----- Gh_D01G0824 [Gossypium hirsutum] (79) | | | | \-95-+ | | /--51-+ /-93-+ \----- Gorai.002G110200.1 [Gossypium raimondii] (145) | | | | | | | | | | | \--------------- Thecc1EG033437t1 [Theobroma cacao] (65) | | | | | | | | | /-89-+ /----- Gh_D11G2928 [Gossypium hirsutum] (18) | | | | | | /-99-+ | | | | | | | \----- Gorai.007G336800.1 [Gossypium raimondii] (95) | | | | | \---100---+ | /-76-+ | | | | /----- Gh_A11G2618 [Gossypium hirsutum] (50) | | | /-66-+ \-52-+ \-99-+ | | | | | | \----- Cotton_A_32253_BGI-A2_v1.0 [Gossypium arboreum] (81) | | | | | | | | | | | | /----- orange1.1g024238m [Citrus sinensis] (49) | | | | | \--------100--------+ | | | | | \----- Ciclev10007003m [Citrus clementina] (59) | | | /-58-+ | | | | | | |------------------------------------ evm.model.supercontig_34.36 [Carica papaya] (62) | | | | | | | | | | | \------------------------------------ Eucgr.F01474.1.p [Eucalyptus grandis] (117) | | | | | | | | | | /----- XP_010557246.1 [Tarenaya hassleriana] (47) | | | | \-----------------83----------------+ | | | | \----- AA61G00655 [Aethionema arabicum] (118) | | | | | | | | /----- Cagra.1310s0011.1.p [Capsella grandiflora] (8) | | | | /-100+ | | | | | \----- Carubv10012495m [Capsella rubella] (54) | | | | /-70-+ | | \-68-+ | \---------- Bostr.6758s0074.1.p [Boechera stricta] (129) | | | | | | | /-99-+ /----- 474686 [Arabidopsis lyrata] (20) | | | | | /-100+ | | | | | | \----- Araha.35607s0003.1.p [Arabidopsis halleri] (73) | | | | \-99-+ | | | | \---------- AT1G56170.1 [Arabidopsis thaliana] (127) | | | | | | | /-75-+ /----- XP_013588595.1 [Brassica oleracea] (15) | | | | | | | | | | | /-100+----- GSBRNA2T00098924001 [Brassica napus] (64) | | | | | | | | | | | | | \----- XP_009104135.1 [Brassica rapa] (96) | | \---------66---------+ \----93---+ | | | | /----- 676760384 [Sisymbrium irio] (48) | | | \-59-+ | | | \----- Tp1g41810 [Thellungiella parvula] (94) | /-85-+ | | | | \------------------------- Thhalv10011820m [Eutrema salsugineum] (52) | | | | | | /----- Gh_D11G2708 [Gossypium hirsutum] (9) | | | | | | | |----- Gorai.007G295600.1 [Gossypium raimondii] (28) | | | /---100---+ | | | | |----- Cotton_A_26323_BGI-A2_v1.0 [Gossypium arboreum] (137) | | | | | | | | | \----- Gh_A11G2393 [Gossypium hirsutum] (153) | | | | | | | | /----- Gorai.004G242200.1 [Gossypium raimondii] (23) | | | /-97-+ | | | | | | |----- Cotton_A_32311_BGI-A2_v1.0 [Gossypium arboreum] (33) + | | | | /-100+ | | | | | | |----- Gh_A08G1872 [Gossypium hirsutum] (74) | | | | | | | | | | | \-74-+ \----- Gh_D08G2234 [Gossypium hirsutum] (132) | | | /-97-+ | | | | | | \---------- Thecc1EG026585t10 [Theobroma cacao] (36) | | | | | | | | | | /---------- Neem_8948_f_2 [Azadirachta indica] (88) | | | | | | | | | /-93-+ \---100---+ /----- orange1.1g019814m [Citrus sinensis] (98) | | | | | \-100+ | | | | | \----- Ciclev10002189m [Citrus clementina] (170) | | | | | | | | | | /----- EcC052525.10 [Eucalyptus camaldulensis] (76) | | | | \--------100--------+ | | | | \----- Eucgr.H04476.1.p [Eucalyptus grandis] (120) | | | /--80-+ | | | | | /----- Gh_A02G0284 [Gossypium hirsutum] (26) | | | | | /-52-+ | | | | | | \----- Cotton_A_08309_BGI-A2_v1.0 [Gossypium arboreum] (130) | | | | | /-100+ | | | | | | | /----- Gh_D02G0349 [Gossypium hirsutum] (140) | | \---------92--------+ | | \-100+ | | | \------99------+ \----- Gorai.005G040900.1 [Gossypium raimondii] (135) | | | | | | | \--------------- Thecc1EG020537t1 [Theobroma cacao] (41) | | | | | \------------------------------------ EcS588749.10 [Eucalyptus camaldulensis] (121) | | |-96-+ /----- XP_009110863.1 [Brassica rapa] (7) | | | | | /---100---+----- GSBRNA2T00047202001 [Brassica napus] (38) | | | | | | | \----- GSBRNA2T00051514001 [Brassica napus] (63) | | | | | /-72-+ /---------- Rsa1.0_00627.1_g00013.1 [Raphanus sativus] (35) | | | | | | | | | | /----- GSBRNA2T00019324001 [Brassica napus] (58) | | | \-82-+ | | | | | |----- XP_009118332.1 [Brassica rapa] (150) | | /-66-+ \-73-+ | | | | |----- XP_013604827.1 [Brassica oleracea] (138) | | | | | | | | | \----- GSBRNA2T00122272001 [Brassica napus] (152) | | | | | | | \-------------------- KFK43201.1 [Arabis alpina] (31) | | | | | | /----- Araha.32703s0008.1.p [Arabidopsis halleri] (13) | | | /-100+ | | | | \----- 470975 [Arabidopsis lyrata] (115) | | | /-81-+ | | | | \---------- AT1G08970.1 [Arabidopsis thaliana] (143) | | | | | | | | /----- Cagra.4395s0081.1.p [Capsella grandiflora] (45) | | |----51---+---100---+ | | | | \----- Carubv10010196m [Capsella rubella] (77) | | | | | | | \--------------- Bostr.25219s0051.1.p [Boechera stricta] (159) | | | | | |------------------------- AA218G00009 [Aethionema arabicum] (30) | | | | | /-51-+------------------------- Tp1g07580 [Thellungiella parvula] (39) | | | | | | | |------------------------- Thhalv10008649m [Eutrema salsugineum] (46) | | | | | | | | /----- Csa03g012380.1 [Camelina sativa] (80) | | | |--------100--------+ | | | | \----- Csa17g012450.1 [Camelina sativa] (154) | | | | | | | | /---------- GSBRNA2T00156196001 [Brassica napus] (87) | | | | | | | | | | /----- GSBRNA2T00100534001 [Brassica napus] (90) | \--------------72--------------+ | |-80-+ | | |------51------+ \----- XP_013586294.1 [Brassica oleracea] (133) | | | | | | | |---------- Rsa1.0_09517.1_g00001.1 [Raphanus sativus] (92) | | | | | | | \---------- XP_009148153.1 [Brassica rapa] (157) | | | | | |------------------------- 676723752 [Sisymbrium irio] (93) | | | | | \------------------------- RrC7591_p2 [Raphanus raphanistrum] (151) | | | \------------------------------ XP_010528866.1 [Tarenaya hassleriana] (70) | | /----- Tp_un0002_061 [Thellungiella parvula] (42) | /-89-+ | | \----- Thhalv10023684m [Eutrema salsugineum] (144) \---------------------------77--------------------------+ \---------- 676790660 [Sisymbrium irio] (57) |