PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM4674
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Subtree rooted at node 89: /----- GSBRNA2T00130612001 [Brassica napus] (4) /-100+ | \----- XP_013607402.1 [Brassica oleracea] (33) /-100+ | \---------- GSBRNA2T00121148001 [Brassica napus] (11) /-100-+ | \--------------- XP_009125531.1 [Brassica rapa] (6) /-100+ | | /----- RrC105_p3 [Raphanus raphanistrum] (10) | \------100------+ | \----- Rsa1.0_00017.1_g00123.1 [Raphanus sativus] (34) | | /----- GSBRNA2T00099861001 [Brassica napus] (15) /-55-+ /-100+ | | | \----- XP_013599147.1 [Brassica oleracea] (24) | | /-100+ | | | | /----- XP_009138139.1 [Brassica rapa] (29) | | | \-100+ | \----100---+ \----- GSBRNA2T00077809001 [Brassica napus] (41) | | | | /----- Rsa1.0_00237.1_g00037.1 [Raphanus sativus] (22) /-88-+ \---100---+ | | \----- RrC7110_p1 [Raphanus raphanistrum] (37) | | | | /----- RrC2660_p3 [Raphanus raphanistrum] (7) | | /---100---+ | | | \----- Rsa1.0_00941.1_g00003.1 [Raphanus sativus] (32) | | | /-53-+ \------100------+ /---------- XP_013629448.1 [Brassica oleracea] (18) | | | | | | \-100+ /----- XP_009108835.1 [Brassica rapa] (19) | | \-94-+ /-100+ | \----- GSBRNA2T00081255001 [Brassica napus] (35) | | | | | \------------------------------------ 676780880 [Sisymbrium irio] (9) /-100-+ | | | \----------------------------------------- Tp7g30500 [Thellungiella parvula] (36) | | | \---------------------------------------------- Thhalv10024320m [Eutrema salsugineum] (46) | | /----- Csa12g013230.1 [Camelina sativa] (5) | /-100+ | | \----- Csa10g009630.1 [Camelina sativa] (48) /-100+ /-99-+ | | | | /----- Cagra.4093s0003.1.p [Capsella grandiflora] (13) | | | \-100+ | | /-100-+ \----- Carubv10004063m [Capsella rubella] (45) | | | | | | | \--------------- Bostr.7867s1124.1.p [Boechera stricta] (44) | | | /-100+ \--------------100-------------+ /----- 491433 [Arabidopsis lyrata] (12) | | | /-100+ | | | | \----- Araha.4996s0012.1.p [Arabidopsis halleri] (38) | | \----100---+ | | \---------- AT4G32730.2 [Arabidopsis thaliana] (26) --100+ | | \--------------------------------------------------------- AA94G00016 [Aethionema arabicum] (25) | | /----- XP_010526179.1 [Tarenaya hassleriana] (31) \---------------------------100--------------------------+ \----- XP_010526114.1 [Tarenaya hassleriana] (42) Root part of tree: /------------------------------------------------------------------- orange1.1g047353m [Citrus sinensis] (1) | |------------------------------------------------------------------- Ciclev10007316m [Citrus clementina] (23) | | /-------- Gh_D05G0497 [Gossypium hirsutum] (2) | /---100--+ | | \-------- Gorai.009G051000.1 [Gossypium raimondii] (43) | /--100--+ | | \----------------- Gh_A05G0383 [Gossypium hirsutum] (8) | | | /--100--+ /-------- Gh_D07G0232 [Gossypium hirsutum] (16) | | | /---100--+ | | | | \-------- Gorai.001G028200.1 [Gossypium raimondii] (40) | | \--100--+ | | | /-------- Cotton_A_07211_BGI-A2_v1.0 [Gossypium arboreum] (21) | | \---100--+ + /---100--+ \-------- Gh_A07G0175 [Gossypium hirsutum] (27) | | | | | | /-------- Gh_D06G1002 [Gossypium hirsutum] (3) | | | /---99---+ | | | | \-------- Gorai.010G110000.1 [Gossypium raimondii] (49) | /--100--+ \------100------+ | | | | /-------- Cotton_A_36314_BGI-A2_v1.0 [Gossypium arboreum] (14) | | | \---100--+ | | | \-------- Gh_A06G0860 [Gossypium hirsutum] (30) | | | | /---100--+ \------------------------------------------ Thecc1EG047091t1 [Theobroma cacao] (20) | | | | | | /-------- (89) | | | /---83---+ | | | | \-------- Eucgr.C02893.1.p [Eucalyptus grandis] (17) \--100--+ \---------------74---------------+ | \----------------- evm.model.supercontig_78.76 [Carica papaya] (28) | | /-------- Neem_29936_f_1 [Azadirachta indica] (39) \------------------------100-----------------------+ \-------- Neem_3839_f_3 [Azadirachta indica] (47) |