PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Phylogenetic Tree for OGEM400
Phylogenetic tree for protein ? help Back to Top

      Subtree rooted at node 272:

                                                    /-------------------- Bostr.0556s0555.1.p [Boechera stricta]                  (4)
                                                    |                                 
                                                    |              /----- Csa06g011390.1 [Camelina sativa]                        (9)
                                                    |         /-100+                  
                                               /-62-+         |    \----- Csa04g018350.1 [Camelina sativa]                        (13)
                                               |    |    /-100+                       
                                               |    |    |    \---------- Csa09g022510.1 [Camelina sativa]                        (43)
                                               |    \-50-+                            
                                               |         |         /----- Cagra.27691s0001.1.p [Capsella grandiflora]             (62)
                               /-------63------+         \---100---+                  
                               |               |                   \----- Carubv10017737m [Capsella rubella]                      (89)
                               |               |                                      
                               |               |                   /----- AT3G29035.1 [Arabidopsis thaliana]                      (34)
                               |               \---------98--------+                  
                               |                                   \----- 484673 [Arabidopsis lyrata]                             (61)
                               |                                                      
                               |                                   /----- RrC7533_p1 [Raphanus raphanistrum]                      (12)
                               |                         /---100---+                  
                               |                         |         \----- Rsa1.0_00387.1_g00044.1 [Raphanus sativus]              (152)
                               |                         |                            
                               |                    /-100+         /----- XP_009151811.1 [Brassica rapa]                          (36)
                               |                    |    |    /-100+                  
                               |                    |    |    |    \----- GSBRNA2T00144521001 [Brassica napus]                    (72)
                               |                    |    \-100+                       
                               |               /-100+         |    /----- XP_013595617.1 [Brassica oleracea]                      (60)
                               |               |    |         \-100+                  
                          /-59-+               |    |              \----- GSBRNA2T00142881001 [Brassica napus]                    (84)
                          |    |               |    |                                 
                          |    |               |    \-------------------- 676759600 [Sisymbrium irio]                             (67)
                          |    |               |                                      
                          |    |               |                   /----- GSBRNA2T00051194001 [Brassica napus]                    (23)
                          |    |               |              /-100+                  
                          |    |               |              |    \----- XP_013609231.1 [Brassica oleracea]                      (158)
                          |    |          /-100+         /-100+                       
                          |    |          |    |         |    |    /----- XP_009111778.1 [Brassica rapa]                          (69)
                          |    |          |    |         |    \-100+                  
                          |    |          |    |---100---+         \----- GSBRNA2T00009829001 [Brassica napus]                    (93)
                /----57---+    |          |    |         |                            
                |         |    |          |    |         |         /----- Rsa1.0_00568.1_g00009.1 [Raphanus sativus]              (74)
                |         |    |    /-100-+    |         \---100---+                  
                |         |    |    |     |    |                   \----- RrC3365_p1 [Raphanus raphanistrum]                      (110)
                |         |    |    |     |    |                                      
                |         |    |    |     |    \------------------------- Tp2g17680 [Thellungiella parvula]                       (58)
                |         |    \-72-+     |                                           
                |         |         |     \------------------------------ Thhalv10004583m [Eutrema salsugineum]                   (81)
                |         |         |                                                 
                |         |         \------------------------------------ KFK33777.1 [Arabis alpina]                              (156)
                |         |                                                           
                |         \---------------------------------------------- AA53G01090 [Aethionema arabicum]                        (159)
                |                                                                     
                |                                                  /----- XP_013613533.1 [Brassica oleracea]                      (16)
                |                                             /-99-+                  
                |                                             |    \----- GSBRNA2T00044895001 [Brassica napus]                    (40)
                |                                        /-100+                       
                |                                        |    |    /----- GSBRNA2T00114310001 [Brassica napus]                    (123)
                |                                        |    \-100+                  
                |                                   /-100+         \----- XP_009139909.1 [Brassica rapa]                          (162)
                |                                   |    |                            
                |                                   |    |         /----- RrC3174_p1 [Raphanus raphanistrum]                      (127)
                |                              /-73-+    \---100---+                  
                |                              |    |              \----- Rsa1.0_01302.1_g00005.1 [Raphanus sativus]              (151)
                |                              |    |                                 
                |                              |    \-------------------- 676775128 [Sisymbrium irio]                             (164)
                |                              |                                      
                |                              |                   /----- GSBRNA2T00063201001 [Brassica napus]                    (21)
           /-55-+                              |              /-100+                  
           |    |                         /-58-+              |    \----- XP_013590191.1 [Brassica oleracea]                      (73)
           |    |                         |    |------100-----+                       
           |    |                         |    |              |    /----- GSBRNA2T00098528001 [Brassica napus]                    (94)
           |    |                         |    |              \-100+                  
           |    |                   /--64-+    |                   \----- XP_009125108.1 [Brassica rapa]                          (116)
           |    |                   |     |    |                                      
           |    |                   |     |    \------------------------- Tp7g02380 [Thellungiella parvula]                       (124)
           |    |              /-99-+     |                                           
           |    |              |    |     \------------------------------ Thhalv10027874m [Eutrema salsugineum]                   (95)
           |    |              |    |                                                 
           |    |              |    \------------------------------------ Thhalv10027479m [Eutrema salsugineum]                   (141)
           |    |              |                                                      
           |    |              |                                   /----- Araha.25334s0001.1.p [Arabidopsis halleri]              (29)
           |    |              |                              /-100+                  
           |    |         /-82-+                              |    \----- 494028 [Arabidopsis lyrata]                             (111)
           |    |         |    |               /------100-----+                       
           |    |         |    |               |              \---------- AT5G39610.1 [Arabidopsis thaliana]                      (133)
      --54-+    |         |    |               |                                      
           |    |         |    |               |                   /----- Csa11g055650.1 [Camelina sativa]                        (64)
           |    |         |    |               |              /-78-+                  
           |    |         |    |               |              |    \----- Csa10g046940.1 [Camelina sativa]                        (174)
           |    |         |    \-------89------+         /-100+                       
           |    |    /-99-+                    |         |    \---------- Csa12g081820.1 [Camelina sativa]                        (155)
           |    |    |    |                    |    /-85-+                            
           |    |    |    |                    |    |    |         /----- Carubv10005201m [Capsella rubella]                      (112)
           |    |    |    |                    |    |    \---100---+                  
           |    |    |    |                    \-88-+              \----- Cagra.6981s0001.1.p [Capsella grandiflora]              (157)
           |    \-91-+    |                         |                                 
           |         |    |                         \-------------------- Bostr.10058s0039.1.p [Boechera stricta]                 (76)
           |         |    |                                                           
           |         |    \---------------------------------------------- KFK33194.1 [Arabis alpina]                              (170)
           |         |                                                                
           |         \--------------------------------------------------- AA9G00035 [Aethionema arabicum]                         (144)
           |                                                                          
           |                                                       /----- XP_010552836.1 [Tarenaya hassleriana]                   (125)
           \--------------------------100--------------------------+                  
                                                                   \----- XP_010528353.1 [Tarenaya hassleriana]                   (168)
                                                                                      
      Subtree rooted at node 304:

                                                    /-------------------- Bostr.13129s0198.1.p [Boechera stricta]                 (2)
                                                    |                                 
                                                    |         /---------- Csa08g056700.1 [Camelina sativa]                        (8)
                                                    |         |                       
                                               /-100+    /-100+    /----- Csa20g010110.1 [Camelina sativa]                        (27)
                                               |    |    |    |    |                  
                                               |    |    |    \-70-+----- Csa13g009710.1 [Camelina sativa]                        (79)
                                               |    |    |         |                  
                                               |    \-99-+         \----- Csa08g056710.1 [Camelina sativa]                        (150)
                                               |         |                            
                                               |         |         /----- Cagra.2925s0018.1.p [Capsella grandiflora]              (31)
                                          /-99-+         \---100---+                  
                                          |    |                   \----- Carubv10001372m [Capsella rubella]                      (96)
                                          |    |                                      
                                          |    |                   /----- Araha.0070s0003.1.p [Arabidopsis halleri]               (14)
                                          |    |              /-100+                  
                                          |    |              |    \----- 487602 [Arabidopsis lyrata]                             (26)
                                          |    \------100-----+                       
                                          |                   \---------- AT5G07680.1 [Arabidopsis thaliana]                      (53)
                                          |                                           
                                          |                        /----- XP_009122319.1 [Brassica rapa]                          (19)
                                          |                   /-100+                  
                                          |                   |    \----- GSBRNA2T00042526001 [Brassica napus]                    (83)
                                          |              /-97-+                       
                                          |              |    |    /----- GSBRNA2T00093660001 [Brassica napus]                    (98)
                                          |              |    \-100+                  
                                          |              |         \----- XP_013610035.1 [Brassica oleracea]                      (154)
                                          |              |                            
                                          |              |         /----- RrC554_p6 [Raphanus raphanistrum]                       (65)
                               /----63----+              |    /-100+                  
                               |          |              |    |    \----- Rsa1.0_00492.1_g00005.1 [Raphanus sativus]              (92)
                               |          |              |    |                       
                               |          |              |    |    /----- GSBRNA2T00071676001 [Brassica napus]                    (71)
                               |          |         /-63-+-66-+-100+                  
                               |          |         |    |    |    \----- XP_009125699.1 [Brassica rapa]                          (190)
                               |          |         |    |    |                       
                               |          |         |    |    |    /----- XP_013618671.1 [Brassica oleracea]                      (99)
                               |          |         |    |    \-87-+                  
                               |          |         |    |         \----- GSBRNA2T00078555001 [Brassica napus]                    (120)
                               |          |----63---+    |                            
                               |          |         |    |--------------- 676744338 [Sisymbrium irio]                             (180)
                               |          |         |    |                            
                               |          |         |    \--------------- Tp6g35220 [Thellungiella parvula]                       (161)
                               |          |         |                                 
                               |          |         \-------------------- Thhalv10014081m [Eutrema salsugineum]                   (28)
                               |          |                                           
                               |          \------------------------------ KFK25161.1 [Arabis alpina]                              (47)
                               |                                                      
                               |                                   /----- AT1G76420.1 [Arabidopsis thaliana]                      (3)
                               |                         /---100---+                  
                               |                         |         \----- 476799 [Arabidopsis lyrata]                             (160)
                               |                         |                            
                               |                    /-54-+    /---------- Csa09g081150.1 [Camelina sativa]                        (15)
                               |                    |    |    |                       
                               |                    |    \-100+    /----- Csa07g047980.1 [Camelina sativa]                        (136)
                               |                    |         \-100+                  
                               |                    |              \----- Csa16g040560.1 [Camelina sativa]                        (150)
                               |               /-100+                                 
                               |               |    |              /----- Cagra.0799s0114.1.p [Capsella grandiflora]              (48)
                               |               |    |------100-----+                  
                               |               |    |              \----- Carubv10022061m [Capsella rubella]                      (130)
                               |               |    |                                 
                               |               |    \-------------------- Bostr.20129s0079.1.p [Boechera stricta]                 (163)
                               |               |                                      
                               |               |------------------------- Tp5g31580 [Thellungiella parvula]                       (6)
                               |               |                                      
                               |               |                   /----- XP_009106303.1 [Brassica rapa]                          (7)
                               |               |              /-90-+                  
                               |               |              |    \----- GSBRNA2T00146607001 [Brassica napus]                    (11)
                               |               |         /-81-+                       
                               |               |         |    |    /----- GSBRNA2T00147768001 [Brassica napus]                    (114)
                               |               |         |    \-99-+                  
                               |               |----80---+         \----- XP_013588851.1 [Brassica oleracea]                      (115)
                               |               |         |                            
                               |               |         |         /----- Rsa1.0_07698.1_g00001.1 [Raphanus sativus]              (37)
                               |               |         \---100---+                  
                               |               |                   \----- RrC5017_p2 [Raphanus raphanistrum]                      (113)
                               |               |                                      
                               |               |                   /----- XP_010539771.1 [Tarenaya hassleriana]                   (10)
                               |               |---------86--------+                  
                               |          /-60-+                   \----- XP_010537223.1 [Tarenaya hassleriana]                   (170)
                               |          |    |                                      
                               |          |    |------------------------- KFK42062.1 [Arabis alpina]                              (18)
                               |          |    |                                      
                               |          |    |                   /----- XP_013619595.1 [Brassica oleracea]                      (39)
                               |          |    |              /-100+                  
                               |          |    |              |    \----- GSBRNA2T00012468001 [Brassica napus]                    (90)
                               |          |    |         /-100+                       
                               |          |    |         |    |    /----- XP_009128177.1 [Brassica rapa]                          (129)
                               |          |    |         |    \-100+                  
                               |          |    |----85---+         \----- GSBRNA2T00083095001 [Brassica napus]                    (148)
                               |          |    |         |                            
                               |          |    |         |         /----- RrC9089_p1 [Raphanus raphanistrum]                      (78)
                               |          |    |         \---100---+                  
                               |          |    |                   \----- Rsa1.0_02385.1_g00001.1 [Raphanus sativus]              (145)
                               |          |    |                                      
                               |          |    |------------------------- Csa09g081160.1 [Camelina sativa]                        (42)
                               |          |    |                                      
                               |          |    |------------------------- Thhalv10019493m [Eutrema salsugineum]                   (44)
                               |          |    |                                      
                               |          |    |------------------------- AA31G00322 [Aethionema arabicum]                        (117)
                               |    /--55-+    |                                      
                               |    |     |    \------------------------- 676741388 [Sisymbrium irio]                             (166)
                               |    |     |                                           
                               |    |     |                        /----- Neem_29819_f_1 [Azadirachta indica]                     (20)
                               |    |     |                   /-100+                  
                               |    |     |                   |    \----- Neem_7002_f_4 [Azadirachta indica]                      (68)
                               |    |     |         /----66---+                       
                               |    |     |         |         |    /----- orange1.1g016283m [Citrus sinensis]                     (35)
                               |    |     |         |         \-100+                  
                               |    |     |         |              \----- Ciclev10001403m [Citrus clementina]                     (142)
                               |    |     |         |                                 
                               |    |     |         |              /----- EcC003993.10 [Eucalyptus camaldulensis]                 (30)
                          /-100+    |     |         |------100-----+                  
                          |    |    |     |         |              \----- Eucgr.F03588.1.p [Eucalyptus grandis]                   (82)
                          |    |    |     |         |                                 
                          |    |    |     |         |              /----- Gorai.002G113300.1 [Gossypium raimondii]                (63)
                          |    |    |     |         |         /-100+                  
                          |    |    |     |         |         |    \----- Gh_D01G0847 [Gossypium hirsutum]                        (85)
                          |    |-56-+     |         |    /-100+                       
                          |    |    |     |         |    |    |    /----- Gh_A01G0819 [Gossypium hirsutum]                        (70)
                          |    |    |     \----59---+    |    \-100+                  
                          |    |    |               |    |         \----- Cotton_A_12683_BGI-A2_v1.0 [Gossypium arboreum]         (169)
                          |    |    |               |-66-+                            
                          |    |    |               |    |         /----- Cotton_A_04612_BGI-A2_v1.0 [Gossypium arboreum]         (88)
                          |    |    |               |    |    /-100+                  
                          |    |    |               |    |    |    \----- Gh_A05G1526 [Gossypium hirsutum]                        (140)
                          |    |    |               |    \-100+                       
                          |    |    |               |         |    /----- Gorai.009G186000.1 [Gossypium raimondii]                (135)
                          |    |    |               |         \-100+                  
                          |    |    |               |              \----- Gh_D05G1697 [Gossypium hirsutum]                        (147)
                          |    |    |               |                                 
                          |    |    |               |-------------------- evm.model.supercontig_286.12 [Carica papaya]            (143)
                          |    |    |               |                                 
                          |    |    |               \-------------------- Thecc1EG034835t1 [Theobroma cacao]                      (149)
                          |    |    |                                                 
                          |    |    \------------------------------------ EcC052965.10 [Eucalyptus camaldulensis]                 (153)
                          |    |                                                      
                          |    |----------------------------------------- (272)
                          |    |                                                      
                          |    |                              /---------- XP_010546158.1 [Tarenaya hassleriana]                   (24)
                          |    |                              |                       
                          |    |--------------97--------------+    /----- XP_010523106.1 [Tarenaya hassleriana]                   (54)
                          |    |                              \-78-+                  
                          |    |                                   \----- XP_010547773.1 [Tarenaya hassleriana]                   (165)
                          |    |                                                      
                          |    |                                   /----- Ciclev10012093m [Citrus clementina]                     (25)
                          |    |                              /-100+                  
                          |    |                              |    \----- orange1.1g018950m [Citrus sinensis]                     (139)
                          |    |               /------100-----+                       
                          |    |               |              |    /----- Neem_35472_f_1 [Azadirachta indica]                     (38)
                          |    |               |              \-100+                  
                          |    |               |                   \----- Neem_3103_f_14 [Azadirachta indica]                     (52)
                          |    |               |                                      
                          |    |               |                   /----- Gh_A11G0633 [Gossypium hirsutum]                        (56)
                          |    |               |              /-93-+                  
                     /-100+    |-------84------+              |    \----- Cotton_A_15474_BGI-A2_v1.0 [Gossypium arboreum]         (80)
                     |    |    |               |         /-100+                       
                     |    |    |               |         |    |    /----- Gh_D11G0743 [Gossypium hirsutum]                        (172)
                     |    |    |               |         |    \-97-+                  
                     |    |    |               |    /-89-+         \----- Gorai.007G079900.1 [Gossypium raimondii]                (173)
                     |    |    |               |    |    |                            
                     |    |    |               \-84-+    \--------------- Thecc1EG018621t1 [Theobroma cacao]                      (167)
                     |    |    |                    |                                 
                     |    |    |                    \-------------------- evm.model.supercontig_14.101 [Carica papaya]            (100)
                     |    |    |                                                      
                     |    |    |                                   /----- Eucgr.I01958.1.p [Eucalyptus grandis]                   (41)
                     |    |    |----------------100----------------+                  
                     |    |    |                                   \----- EcC022004.10 [Eucalyptus camaldulensis]                 (140)
                     |    |    |                                                      
                     |    |    |                                   /----- orange1.1g017827m [Citrus sinensis]                     (45)
                     |    |    |                              /-100+                  
                     |    |    |                              |    \----- Ciclev10020480m [Citrus clementina]                     (118)
                     |    |    |                    /---100---+                       
                     |    |    |                    |         |    /----- Neem_34778_f_1 [Azadirachta indica]                     (55)
                     |    |    |                    |         \-100+                  
                     |    |    |                    |              \----- Neem_12856_f_1 [Azadirachta indica]                     (131)
                     |    |    |                    |                                 
                /-54-+    |    |                    |              /----- Cotton_A_13395_BGI-A2_v1.0 [Gossypium arboreum]         (86)
                |    |    |    |---------97---------+         /-95-+                  
                |    |    |    |                    |         |    \----- Gh_A12G1620 [Gossypium hirsutum]                        (132)
                |    |    |    |                    |    /-100+                       
                |    |    |    |                    |    |    |    /----- Gh_D12G1761 [Gossypium hirsutum]                        (97)
                |    |    |    |                    |    |    \-100+                  
                |    |    |    |                    \-100+         \----- Gorai.008G194400.1 [Gossypium raimondii]                (120)
                |    |    |    |                         |                            
                |    |    |    |                         \--------------- Thecc1EG014073t1 [Theobroma cacao]                      (122)
                |    |    |    |                                                      
                |    |    |    |----------------------------------------- Eucgr.B00529.1.p [Eucalyptus grandis]                   (50)
                |    |    |    |                                                      
                |    |    |    |----------------------------------------- AA44G00040 [Aethionema arabicum]                        (59)
                |    |    |    |                                                      
                |    |    |    |----------------------------------------- evm.model.supercontig_111.22 [Carica papaya]            (77)
                |    |    |    |                                                      
                |    |    |    |----------------------------------------- EcC037763.10 [Eucalyptus camaldulensis]                 (134)
                |    |    |    |                                                      
           /-83-+    |    |    \----------------------------------------- XP_010528773.1 [Tarenaya hassleriana]                   (171)
           |    |    |    |                                                           
           |    |    |    \---------------------------------------------- AA5G00148 [Aethionema arabicum]                         (17)
           |    |    |                                                                
           |    |    \--------------------------------------------------- KFK27900.1 [Arabis alpina]                              (33)
           |    |                                                                     
           |    |                                                  /----- Csa02g068390.1 [Camelina sativa]                        (46)
           |    |                                             /-100+                  
           |    |                                             |    \----- Csa11g097230.1 [Camelina sativa]                        (57)
           |    |                                        /-100+                       
           |    |                                        |    \---------- Csa18g034760.1 [Camelina sativa]                        (51)
           |    |                                   /-96-+                            
      --100+    |                                   |    |         /----- Cagra.0542s0037.1.p [Capsella grandiflora]              (137)
           |    |                                   |    \---100---+                  
           |    |                              /-100+              \----- Carubv10026752m [Capsella rubella]                      (160)
           |    |                              |    |                                 
           |    |                              |    \-------------------- Bostr.26833s0095.1.p [Boechera stricta]                 (66)
           |    \--------------100-------------+                                      
           |                                   |                   /----- 496302 [Arabidopsis lyrata]                             (49)
           |                                   |                   |                  
           |                                   \---------79--------+----- AT5G61430.1 [Arabidopsis thaliana]                      (91)
           |                                                       |                  
           |                                                       \----- Araha.1448s0011.1.p [Arabidopsis halleri]               (119)
           |                                                                          
           \------------------------------------------------------------- Thhalv10004550m [Eutrema salsugineum]                   (138)
                                                                                      
      Root part of tree:

      /------------------------------------------------------------------ RrC9905_p1 [Raphanus raphanistrum]                      (1)
      |                                                                               
      |------------------------------------------------------------------ Rsa1.0_00166.1_g00017.1 [Raphanus sativus]              (87)
      |                                                                               
      |                  /----------------------------------------------- (304)
      |                  |                                                            
      |                  |                                     /--------- XP_013595819.1 [Brassica oleracea]                      (5)
      |                  |                                     |                      
      +                  |                           /---100---+--------- GSBRNA2T00020292001 [Brassica napus]                    (126)
      |                  |                           |         |                      
      |        /---100---+                           |         \--------- XP_009136471.1 [Brassica rapa]                          (146)
      |        |         |                  /---100--+                                
      |        |         |                  |        |         /--------- Rsa1.0_07584.1_g00001.1 [Raphanus sativus]              (110)
      |        |         |                  |        \---100---+                      
      |        |         |        /---100---+                  \--------- RrC422_p5 [Raphanus raphanistrum]                       (121)
      |        |         |        |         |                                         
      \---100--+         \---95---+         \---------------------------- 676729696 [Sisymbrium irio]                             (128)
               |                  |                                                   
               |                  \-------------------------------------- Tp2g24630 [Thellungiella parvula]                       (75)
               |                                                                      
               |                                     /------------------- XP_013618540.1 [Brassica oleracea]                      (22)
               |                                     |                                
               \-----------------100-----------------+         /--------- XP_009130171.1 [Brassica rapa]                          (32)
                                                     \---100---+                      
                                                               \--------- GSBRNA2T00075573001 [Brassica napus]                    (130)