PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM3915
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Subtree rooted at node 80: /----- GSBRNA2T00063089001 [Brassica napus] (3) /-91-+ | \----- XP_009149892.1 [Brassica rapa] (14) /-100+ | | /----- GSBRNA2T00024785001 [Brassica napus] (15) | \-99-+ /----100---+ \----- XP_013630119.1 [Brassica oleracea] (38) | | | | /----- Rsa1.0_04358.1_g00002.1 [Raphanus sativus] (26) | \---100---+ | \----- RrC4255_p1 [Raphanus raphanistrum] (27) | | /----- Carubv10017043m [Capsella rubella] (11) | /-100+ /-59-+ | \----- Cagra.1659s0005.1.p [Capsella grandiflora] (45) | | /-99-+ | | | \---------- Bostr.18473s0195.1.p [Boechera stricta] (53) | | | | | /--99-+ /----- Csa06g021260.1 [Camelina sativa] (19) | | | | /-100+ | | | | | \----- Csa04g030560.1 [Camelina sativa] (50) /-56-+ | | \-100+ | | \-99-+ \---------- Csa09g048010.1 [Camelina sativa] (42) | | | | | | /----- 485126 [Arabidopsis lyrata] (28) | | \------100------+ /-59-+ | \----- AT3G47620.1 [Arabidopsis thaliana] (43) | | | | | \------------------------------- 676760292 [Sisymbrium irio] (22) /-57-+ | | | \------------------------------------ Tp5g14290 [Thellungiella parvula] (18) | | /--68-+ \----------------------------------------- Thhalv10011054m [Eutrema salsugineum] (12) | | /-97-+ \---------------------------------------------- KFK34066.1 [Arabis alpina] (6) | | | \---------------------------------------------------- AA96G00032 [Aethionema arabicum] (4) /-100+ | | /----- XP_010548838.1 [Tarenaya hassleriana] (24) | \------------------------100------------------------+ --90-+ \----- XP_010550606.1 [Tarenaya hassleriana] (47) | \-------------------------------------------------------------- evm.model.supercontig_1815.2 [Carica papaya] (37) Subtree rooted at node 105: /----- Cotton_A_06142_BGI-A2_v1.0 [Gossypium arboreum] (2) /-99-+ | \----- Gh_A12G1522 [Gossypium hirsutum] (13) /----------------------100---------------------+ | | /----- Gh_D12G1644 [Gossypium hirsutum] (20) | \-100+ | \----- Gorai.008G181600.1 [Gossypium raimondii] (57) | | /------------------------------- (80) | | | | /--------------- Thecc1EG013943t1 [Theobroma cacao] (5) | | | | | | /----- Gorai.001G072200.1 [Gossypium raimondii] (8) | | | /-100+ | | | | \----- Gh_D07G0639 [Gossypium hirsutum] (21) | | |-100+ | | | | /----- Gh_A07G0574 [Gossypium hirsutum] (29) | | /-100-+ \-100+ | | | | \----- Cotton_A_02703_BGI-A2_v1.0 [Gossypium arboreum] (39) | /-68-+ | | | | | | | /----- Gh_A12G1603 [Gossypium hirsutum] (23) | | | | | /-100+ | | | | | | \----- Cotton_A_27685_BGI-A2_v1.0 [Gossypium arboreum] (46) | | | | \-100+ | | | /-66-+ | /----- Gh_D12G1742 [Gossypium hirsutum] (25) | | | | | \-100+ /-100+ | | | | \----- Gorai.008G192400.1 [Gossypium raimondii] (30) | | | | | | | | | | | | /----- orange1.1g014326m [Citrus sinensis] (10) | | | | | | /-100+ | | | \-64-+ | | \----- Ciclev10020275m [Citrus clementina] (48) | | /-100+ | \----100---+ | | | | | \---------- Neem_6786_f_2 [Azadirachta indica] (36) | | | | | | | | | | /---------- Cotton_A_09220_BGI-A2_v1.0 [Gossypium arboreum] (7) | | | | | | | | | | \------100------+ /----- Gorai.007G036800.1 [Gossypium raimondii] (16) | | | | | | | | | | \-95-+----- Gh_D11G0333 [Gossypium hirsutum] (55) | | /-96-+ | | | | | | | \----- Gh_A11G0279 [Gossypium hirsutum] (56) | | | | | --85-+ | | | | /----- Eucgr.B00471.1.p [Eucalyptus grandis] (9) | | | | \--------------100-------------+ | | | | \----- EcS597400.10 [Eucalyptus camaldulensis] (54) | | /-100-+ | | | | | | /----- orange1.1g016130m [Citrus sinensis] (40) | | | | \----------------100----------------+ | | | | \----- Ciclev10031757m [Citrus clementina] (44) | \-100+ | | | \---------------------------------------------- evm.model.supercontig_128.6 [Carica papaya] (35) | | | \---------------------------------------------------- Thecc1EG011752t1 [Theobroma cacao] (52) | | /----- Cotton_A_33342_BGI-A2_v1.0 [Gossypium arboreum] (17) | /-100+ | | \----- Gh_A13G0648 [Gossypium hirsutum] (41) \-------------------------99------------------------+ | /----- Gh_A13G0647 [Gossypium hirsutum] (34) \-85-+ \----- Cotton_A_33341_BGI-A2_v1.0 [Gossypium arboreum] (49) Root part of tree: /------------------------------------------------------------------- Gorai.013G084500.1 [Gossypium raimondii] (1) | |------------------------------------------------------------------- Gorai.N023500.1 [Gossypium raimondii] (31) | +------------------------------------------------------------------- Gh_D13G2529 [Gossypium hirsutum] (32) | | /--------------------------------- (105) | | \---------------100---------------+--------------------------------- Gh_D13G2530 [Gossypium hirsutum] (33) | \--------------------------------- Gorai.N023400.1 [Gossypium raimondii] (51) |