PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM306
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 334: /----- Csa12g081560.1 [Camelina sativa] (2) /-99-+ | \----- Csa10g046680.1 [Camelina sativa] (183) /-99-+ | \---------- Csa11g055880.1 [Camelina sativa] (121) /-86-+ | | /----- Carubv10006906m [Capsella rubella] (39) | \---100---+ /-66-+ \----- Cagra.5905s0003.1.p [Capsella grandiflora] (137) | | | | /----- AT5G39820.1 [Arabidopsis thaliana] (64) /-52-+ \------77------+ | | \----- 860234 [Arabidopsis lyrata] (196) | | | \------------------------- Bostr.10058s0013.1.p [Boechera stricta] (66) | |------------------------------ Thhalv10027860m [Eutrema salsugineum] (25) | |------------------------------ Csa33192s010.1 [Camelina sativa] (28) | | /----- 676729964 [Sisymbrium irio] (49) |-----------50-----------+ | \----- Tp7g02250 [Thellungiella parvula] (85) | | /----- GSBRNA2T00098539001 [Brassica napus] (76) /---------72---------+ /-100+ | | | \----- XP_009125115.1 [Brassica rapa] (95) | | /-72-+ | | | | /----- XP_013589257.1 [Brassica oleracea] (188) | | | \-98-+ | |------53------+ \----- GSBRNA2T00049808001 [Brassica napus] (197) | | | | | | /----- Rsa1.0_03533.1_g00002.1 [Raphanus sativus] (150) | | \---100---+ | | \----- RrC29129_p1 [Raphanus raphanistrum] (163) | | | |------------------------------ AA9G00047 [Aethionema arabicum] (148) | | | \------------------------------ XP_010554003.1 [Tarenaya hassleriana] (200) | | /----- Gh_D13G0769 [Gossypium hirsutum] (4) | /-56-+ | | \----- Gorai.013G085000.1 [Gossypium raimondii] (60) | /-50-+ | | | /----- Gh_A13G0655 [Gossypium hirsutum] (37) | | \-90-+ | /-95-+ \----- Cotton_A_39298_BGI-A2_v1.0 [Gossypium arboreum] (166) | | | | | \--------------- Gh_Sca085262G01 [Gossypium hirsutum] (36) | | | /-59-+ /---------- Gh_A03G0874 [Gossypium hirsutum] (19) | | | | | | | | /----- Gh_D02G1257 [Gossypium hirsutum] (81) | | \----97---+-92-+ |------------80-----------+ | \----- Gorai.005G141200.1 [Gossypium raimondii] (162) | | | | | \---------- Cotton_A_36695_BGI-A2_v1.0 [Gossypium arboreum] (179) | | | \------------------------- Thecc1EG011718t1 [Theobroma cacao] (147) | | /----- Gh_A09G0159 [Gossypium hirsutum] (7) | /-100+ | | \----- Cotton_A_30603_BGI-A2_v1.0 [Gossypium arboreum] (128) | /-100+ | | | /----- Gorai.006G017700.1 [Gossypium raimondii] (50) | | \-98-+ | | \----- Gh_D09G0151 [Gossypium hirsutum] (124) | /-63-+ | | | /----- Gorai.012G054800.1 [Gossypium raimondii] (32) | | | /-99-+ | | | | \----- Gh_D04G0450 [Gossypium hirsutum] (171) |--------------68--------------+ \-100+ | | \---------- Cotton_A_19848_BGI-A2_v1.0 [Gossypium arboreum] (33) | | | \-------------------- Thecc1EG018508t1 [Theobroma cacao] (141) | | /--------------- 676715366 [Sisymbrium irio] (9) | | | | /----- Rsa1.0_02564.1_g00005.1 [Raphanus sativus] (13) | /------83------+ /-100+ | | | | \----- RrC6989_p1 [Raphanus raphanistrum] (131) | | \-96-+ | | | /----- XP_013585218.1 [Brassica oleracea] (159) | | \-100+ | | \----- XP_009115419.1 [Brassica rapa] (182) | | | | /----- GSBRNA2T00045496001 [Brassica napus] (16) | | /-100+ | | | \----- XP_013603948.1 [Brassica oleracea] (119) | | /-97-+ | | | | /----- XP_009110048.1 [Brassica rapa] (120) | | | \-100+ | | | \----- GSBRNA2T00083984001 [Brassica napus] (112) | |------61------+ | | |--------------- RrC19533_p1 [Raphanus raphanistrum] (161) | | | | | \--------------- Rsa1.0_01450.1_g00013.1 [Raphanus sativus] (184) | | | /--74-+ /------------------------- Csa14g031790.1 [Camelina sativa] (47) | | | | | | | | /----- Csa03g028620.1 [Camelina sativa] (56) | | | | /-96-+ /-63-+ | | | | \----- Csa17g033960.1 [Camelina sativa] (117) | | | | | /-82-+ | | | |-53-+ | | /----- Carubv10011253m [Capsella rubella] (180) | | | | | | \-100+ | | | | | /-80-+ \----- Cagra.1150s0013.1.p [Capsella grandiflora] (143) | | | | | | | | | /-57-+ | | | \--------------- Bostr.12659s0312.1.p [Boechera stricta] (129) | | | | | \-62-+ | | | | | | /----- AT1G26870.1 [Arabidopsis thaliana] (149) | | | | | \------95------+ | | | | | \----- 335709 [Arabidopsis lyrata] (178) | | | | | | | | | |------------------------------ Tp1g21900 [Thellungiella parvula] (110) | | | | | | | | | \------------------------------ Thhalv10007709m [Eutrema salsugineum] (152) | | | | | | | \------------------------------------ AA39G00617 [Aethionema arabicum] (40) | | | | | | /----- GSBRNA2T00101917001 [Brassica napus] (26) | | | /-100+ | | | | \----- XP_009105638.1 [Brassica rapa] (67) | | /-56-+ /-95-+ | | | | | | /----- GSBRNA2T00112879001 [Brassica napus] (70) | | | | | \-100+ | | | | /-95-+ \----- XP_013589625.1 [Brassica oleracea] (151) | | | | | | | | | | | | /----- Rsa1.0_00170.1_g00016.1 [Raphanus sativus] (170) | | | | /-86-+ \---100---+ | | | | | | \----- RrC872_p2 [Raphanus raphanistrum] (167) | | | | | | | | | | /-95-+ \-------------------- 676720854 [Sisymbrium irio] (43) | | | | | | | | | | | \------------------------- Tp5g24760 [Thellungiella parvula] (72) | | | | | | | | | | /------------------------- Thhalv10019631m [Eutrema salsugineum] (45) | | | \----86----+ | | |-74-+ | | /---------- Csa05g086390.1 [Camelina sativa] (55) | | | | | | | | | | | /-98-+ /----- Csa16g031130.1 [Camelina sativa] (75) | | | \-85-+ | \-97-+ | | | | | \----- Csa07g036390.1 [Camelina sativa] (150) | | | | /-99-+ | | | | | | /----- Cagra.8367s0003.1.p [Capsella grandiflora] (125) | | | | | \---100---+ | | | \-86-+ \----- Carubv10021514m [Capsella rubella] (144) | | | | | | | \-------------------- Bostr.10273s0400.1.p [Boechera stricta] (164) | | | | | |---------------------------------------------- XP_010552578.1 [Tarenaya hassleriana] (35) | | | | | \---------------------------------------------- XP_010551540.1 [Tarenaya hassleriana] (98) | | | | /----- Ciclev10011891m [Citrus clementina] (10) | | /-100+ | | | \----- orange1.1g015827m [Citrus sinensis] (100) | |-------------------56-------------------+ | | | /----- Neem_11660_f_5 [Azadirachta indica] (92) | | \-100+ | | \----- Neem_27137_f_3 [Azadirachta indica] (186) | | | | /----- Neem_15575_f_1 [Azadirachta indica] (34) | | /-100+ | | | \----- Neem_39628_f_1 [Azadirachta indica] (189) | |-------------------95-------------------+ | | | /----- Ciclev10031623m [Citrus clementina] (176) | | \-100+ | | \----- orange1.1g047852m [Citrus sinensis] (194) | | | |--------------------------------------------------- Eucgr.I01940.1.p [Eucalyptus grandis] (88) | | | |--------------------------------------------------- evm.model.supercontig_14.2 [Carica papaya] (130) | | | |--------------------------------------------------- evm.model.supercontig_128.20 [Carica papaya] (113) | | | |--------------------------------------------------- EcC039244.20 [Eucalyptus camaldulensis] (114) | | | | /----- EcC051253.10 [Eucalyptus camaldulensis] (126) | \---------------------100---------------------+ | \----- Eucgr.G02506.1.p [Eucalyptus grandis] (187) | | /----- GSBRNA2T00045062001 [Brassica napus] (5) | /-99-+ | | \----- XP_009142151.1 [Brassica rapa] (199) | /-100+ | | | /----- XP_013634618.1 [Brassica oleracea] (94) | | \-100+ | | \----- GSBRNA2T00084755001 [Brassica napus] (133) | /-90-+ | | | /----- RrC14646_p1 [Raphanus raphanistrum] (14) | | | /-61-+ | | | | \----- Rsa1.0_55877.1_g00001.1 [Raphanus sativus] (185) | | \-90-+ | | | /----- Rsa1.0_15651.1_g00001.1 [Raphanus sativus] (140) | | \-59-+ | | \----- Rsa1.0_09028.1_g00001.1 [Raphanus sativus] (198) | /----70---+ | | | /----- XP_009133561.1 [Brassica rapa] (11) | | | /-79-+ | | | | \----- GSBRNA2T00139105001 [Brassica napus] (111) | | | /-87-+ | | | | | /----- GSBRNA2T00075489001 [Brassica napus] (65) | | | | \-100+ | | \-83-+ \----- XP_013626851.1 [Brassica oleracea] (120) | | | | | | /----- Rsa1.0_02246.1_g00004.1 [Raphanus sativus] (78) | | \----99---+ | | \----- RrC4606_p1 [Raphanus raphanistrum] (136) | | | | /----- XP_013634805.1 [Brassica oleracea] (23) | /--67-+ /-100+ | | | | \----- GSBRNA2T00011138001 [Brassica napus] (142) | | | /-100+ | | | | \---------- GSBRNA2T00016973001 [Brassica napus] (57) | | | /-100+ /-81-+ | | | \--------------- XP_009142897.1 [Brassica rapa] (59) | | | | /-100+ | | | | | | /----- Rsa1.0_17595.1_g00001.1 [Raphanus sativus] (99) | | /-63-+ | | \------100-----+ | | | | |-93-+ \----- RrC5053_p2 [Raphanus raphanistrum] (127) | | | | | | | | | | | \------------------------- 676762560 [Sisymbrium irio] (118) | | | | | | | | | \------------------------------ Tp4g25130 [Thellungiella parvula] (174) | | | | | | | | /----- Thhalv10017054m [Eutrema salsugineum] (22) | | | \--------------64--------------+ | | | \----- AA21G00088 [Aethionema arabicum] (177) | | | | | /-68-+ /----- Araha.0173s0016.1.p [Arabidopsis halleri] (12) | | | | /-100+ | | | | | \----- 483400 [Arabidopsis lyrata] (30) | | | | /-100+ | | | | | \---------- AT2G43000.1 [Arabidopsis thaliana] (173) | | | | /-76-+ | | | | | \--------------- Bostr.25993s0479.1.p [Boechera stricta] (58) | | | | | | | | | | /----- Carubv10023730m [Capsella rubella] (80) | | /-70-+ | |------100-----+ | | | | \---------69---------+ \----- Cagra.0202s0012.1.p [Capsella grandiflora] (83) | | | | | | | | | | /----- Csa06g049190.1 [Camelina sativa] (153) | | | | | /-100+ | | | | | | \----- Csa04g060600.1 [Camelina sativa] (181) | |-68-+ | \---100---+ | | | | \---------- Csa05g007460.1 [Camelina sativa] (193) | | | | | | | \---------------------------------------------- KFK37142.1 [Arabis alpina] (97) | | | | | \--------------------------------------------------- XP_010525613.1 [Tarenaya hassleriana] (134) | | | | /----- Gh_A04G0414 [Gossypium hirsutum] (18) | | /-100+ | | | \----- Cotton_A_29358_BGI-A2_v1.0 [Gossypium arboreum] (130) | | /---100---+ | | | | /----- Gh_D05G3221 [Gossypium hirsutum] (29) | | | \-99-+ | | | \----- Gorai.009G357700.1 [Gossypium raimondii] (73) | | | | | | /----- Cotton_A_24794_BGI-A2_v1.0 [Gossypium arboreum] (24) | | | /-97-+ | | /-59-+ | \----- Gh_A08G2057 [Gossypium hirsutum] (87) | | | | | | | | | /-100+---------- Gorai.004G270400.1 [Gossypium raimondii] (74) | | | | | | | | | | | \---------- Gh_D08G2671 [Gossypium hirsutum] (132) | | | | | | | | \-76-+ /----- Gh_D01G0278 [Gossypium hirsutum] (68) | | /-64-+ | /-91-+ | | | | | | \----- Gorai.002G036700.1 [Gossypium raimondii] (180) | | | | \-100+ | | | | | /----- Gh_A01G0267 [Gossypium hirsutum] (69) | | | | \-51-+ | |------------76-----------+ | \----- Cotton_A_15893_BGI-A2_v1.0 [Gossypium arboreum] (135) --54-+ | | | | | | \------------------------- Thecc1EG032389t1 [Theobroma cacao] (46) | | | | | \------------------------------ Thecc1EG032393t1 [Theobroma cacao] (158) | | | | /----- Gh_D06G2096 [Gossypium hirsutum] (20) | | /-85-+ | | | \----- Gorai.010G236700.1 [Gossypium raimondii] (90) | | /-61-+ | | | \---------- Gh_A06G1947 [Gossypium hirsutum] (160) | | /-100+ | | | \--------------- Cotton_A_05272_BGI-A2_v1.0 [Gossypium arboreum] (139) | | | | | |-------------------- Thecc1EG029321t1 [Theobroma cacao] (54) | |-----------------71----------------+ | | | /----- Gh_D06G1546 [Gossypium hirsutum] (71) | | | /-97-+ | | | | \----- Gorai.010G171100.1 [Gossypium raimondii] (86) | | \---100---+ | | | /----- Gh_A06G1226 [Gossypium hirsutum] (91) | | \-97-+ | | \----- Cotton_A_37610_BGI-A2_v1.0 [Gossypium arboreum] (115) | | | |-------------------------------------------------------- Eucgr.F01463.1.p [Eucalyptus grandis] (21) | | | | /----- orange1.1g046948m [Citrus sinensis] (27) | | /-75-+ | | | \----- Ciclev10005465m [Citrus clementina] (165) | | /-100+ | | | \---------- Ciclev10006695m [Citrus clementina] (195) | |-------------------78-------------------+ | | \--------------- Neem_19267_f_1 [Azadirachta indica] (155) | | | | /----- Neem_585_f_6 [Azadirachta indica] (41) | | /-100+ | | | \----- Neem_31069_f_2 [Azadirachta indica] (62) | | /----85---+ | | | | /----- Ciclev10032203m [Citrus clementina] (84) | | | \-100+ | | | \----- orange1.1g021785m [Citrus sinensis] (190) | | | | | | /----- Cotton_A_33158_BGI-A2_v1.0 [Gossypium arboreum] (52) | |-----------------68----------------+ /-89-+ | | | | \----- Gh_A07G0739 [Gossypium hirsutum] (93) | | | /-100+ | | | | | /----- Gorai.001G091900.1 [Gossypium raimondii] (190) | | | | \-53-+ | | \-80-+ \----- Gh_D07G0802 [Gossypium hirsutum] (123) | | | | | \--------------- Thecc1EG001955t1 [Theobroma cacao] (168) | | | |-------------------------------------------------------- Eucgr.A02028.1.p [Eucalyptus grandis] (96) | | | |-------------------------------------------------------- Eucgr.K01228.1.p [Eucalyptus grandis] (160) | | | \-------------------------------------------------------- evm.model.supercontig_67.60 [Carica papaya] (157) | | /----- XP_010542556.1 [Tarenaya hassleriana] (42) \---------------------------96--------------------------+ \----- XP_010552401.1 [Tarenaya hassleriana] (154) Root part of tree: /------------------------------------------------------------------ Cagra.5641s0055.1.p [Capsella grandiflora] (1) | |------------------------------------------------------------------ Carubv10014270m [Capsella rubella] (82) | | /----- (334) | /-------------------72-------------------+ | | \----- AA26G00012 [Aethionema arabicum] (191) | | | | /------------------------------ Tp3g11050 [Thellungiella parvula] (3) | | | | | | /----- XP_009146571.1 [Brassica rapa] (6) | | | /-100+ | | | | \----- GSBRNA2T00028217001 [Brassica napus] (138) | | | /-100+ | | | | | /----- GSBRNA2T00023738001 [Brassica napus] (145) | | | | \-100+ | | | /-100+ \----- XP_013585182.1 [Brassica oleracea] (169) | | | | | | | /--92-+ | | /----- Rsa1.0_00938.1_g00006.1 [Raphanus sativus] (79) | | | | | \---100---+ | | | | | \----- RrC4162_p1 [Raphanus raphanistrum] (172) | | | | | | | | | /-69-+ /----- GSBRNA2T00026353001 [Brassica napus] (8) | | | | | | /-89-+ | | | | | | | \----- XP_013611181.1 [Brassica oleracea] (51) | | | | | | /-100+ | | | | | | | | /----- XP_009124687.1 [Brassica rapa] (48) | | /-92-+ | | | | \-89-+ | /-90-+ | | \-94-+ \-100+ \----- GSBRNA2T00076462001 [Brassica napus] (140) + | | | | | | | | | | | | | /----- Rsa1.0_04850.1_g00004.1 [Raphanus sativus] (17) | | | | | | \---100---+ | | | | | | \----- RrC14644_p1 [Raphanus raphanistrum] (31) | | | | | | | | | | | \------------------------- 676724508 [Sisymbrium irio] (175) | | | | | | | |-90-+ \------------------------------------ Thhalv10021225m [Eutrema salsugineum] (156) | | | | | | | | /----- GSBRNA2T00042350001 [Brassica napus] (38) | | | | /-100+ | | | | | \----- XP_013627414.1 [Brassica oleracea] (44) | | | | /-100+ | /-98-+ | | | | /----- GSBRNA2T00137740001 [Brassica napus] (77) | | | | | | \-100+ | | | | \------------99-----------+ \----- XP_009135261.1 [Brassica rapa] (122) | | | | | | | | | | /----- RrC2216_p1 [Raphanus raphanistrum] (53) | | | | \---100---+ | | | | \----- Rsa1.0_00314.1_g00017.1 [Raphanus sativus] (170) | | | | | /-98-+ | \---------------------------------------------- KFK38633.1 [Arabis alpina] (192) | | | | | | | | /----- AT3G12910.1 [Arabidopsis thaliana] (89) | | | | /-62-+ | | | | | \----- 478652 [Arabidopsis lyrata] (116) | | | \-------------------100------------------+ | | | \---------- Araha.24857s0004.1.p [Arabidopsis halleri] (146) \-100+ | | \-------------------------------------------------------- Bostr.3640s0064.1.p [Boechera stricta] (110) | | /----- Csa01g014020.1 [Camelina sativa] (15) | /-99-+ | | \----- Csa19g017110.1 [Camelina sativa] (63) \------------------------100-----------------------+ \---------- Csa15g016850.1 [Camelina sativa] (61) |