PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM3008
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 116: /----- RrC875_p3 [Raphanus raphanistrum] (2) /-51-+ | \----- Rsa1.0_01811.1_g00005.1 [Raphanus sativus] (46) /----100---+ | \---------- GSBRNA2T00119998001 [Brassica napus] (67) | | /---------- XP_013639359.1 [Brassica oleracea] (8) /------59------+ | | | /-70-+ /----- GSBRNA2T00005976001 [Brassica napus] (18) | | | \-100+ | | | \----- XP_009124864.1 [Brassica rapa] (25) | \-100-+ | | /----- Rsa1.0_09683.1_g00001.1 [Raphanus sativus] (21) | \---100---+ | \----- RrC14130_p1 [Raphanus raphanistrum] (39) | /-91-+ /-------------------------- RrC23110_p1 [Raphanus raphanistrum] (3) | | | | | | /----- Rsa1.0_00055.1_g00053.1 [Raphanus sativus] (43) | | | /-------97------+ | | /-100+ | \----- RrC15896_p2 [Raphanus raphanistrum] (48) | | | | | | | | | | /---------- XP_013625432.1 [Brassica oleracea] (44) | | | \-73-+ | | | | | /-100+ /----- GSBRNA2T00111892001 [Brassica napus] (56) /-99-+ \-50-+ | | \-100+ | | | \-100-+ \----- GSBRNA2T00084442001 [Brassica napus] (63) | | | | | | | \--------------- XP_009134849.1 [Brassica rapa] (61) | | | | | \------------------------------- 676758678 [Sisymbrium irio] (57) /-100-+ | | | |----------------------------------------- Thhalv10021244m [Eutrema salsugineum] (42) | | | | | \----------------------------------------- Tp3g04570 [Thellungiella parvula] (58) | | | \---------------------------------------------- KFK37976.1 [Arabis alpina] (5) | | /----- Araha.24789s0002.1.p [Arabidopsis halleri] (4) /-100+ /-100+ | | | \----- 477862 [Arabidopsis lyrata] (52) | | /------100------+ | | | \---------- AT3G05690.1 [Arabidopsis thaliana] (53) | | | | | | /----- Csa15g007070.1 [Camelina sativa] (7) | | | /-100+ | | | | \----- Csa19g008200.1 [Camelina sativa] (24) | \-----------100-----------+ /-100+ /-100+ | | \---------- Csa01g006590.1 [Camelina sativa] (37) | | | /-100-+ | | | | | /----- Cagra.2108s0005.1.p [Capsella grandiflora] (29) | | | | \---100---+ | | \-100+ \----- Carubv10014086m [Capsella rubella] (40) | | | | | \--------------------- Bostr.2570s0105.1.p [Boechera stricta] (31) | | | \--------------------------------------------------------- AA10G00050 [Aethionema arabicum] (6) | | /----- Ciclev10012232m [Citrus clementina] (9) | /-100+ | | \----- orange1.1g021081m [Citrus sinensis] (35) | /-----------100-----------+ | | | /----- Neem_9117_f_3 [Azadirachta indica] (14) | | \-100+ | | \----- Neem_29677_f_1 [Azadirachta indica] (65) | | | | /---------- Gorai.009G394400.1 [Gossypium raimondii] (13) --100+ | | | | /-100+ /----- Cotton_A_16018_BGI-A2_v1.0 [Gossypium arboreum] (26) | | | \-100+ | | /--72-+ \----- Gh_A04G0462 [Gossypium hirsutum] (32) | | | | | | | \--------------- Thecc1EG022984t1 [Theobroma cacao] (62) | | | | /-100+ | /----- Cotton_A_29133_BGI-A2_v1.0 [Gossypium arboreum] (15) | | | | /-78-+ | | | /-100+ | \----- Gh_A11G2828 [Gossypium hirsutum] (45) | | | | | /-100+ | | | | | | | /----- Gh_D11G3183 [Gossypium hirsutum] (38) | | | | | | \-100+ | | | | | | \----- Gorai.007G363800.1 [Gossypium raimondii] (51) | | | | \--98-+ | | | /-87-+ | /---------- Gh_A01G1710 [Gossypium hirsutum] (19) | | | | | | | | | | | | \-100+ /----- Gorai.002G234400.1 [Gossypium raimondii] (30) \---------100--------+ | | | \-100+ | | | | \----- Gh_D01G1961 [Gossypium hirsutum] (49) | \-98-+ | | | \-------------------------- evm.model.supercontig_104.9 [Carica papaya] (22) | | | | /----- Eucgr.A02570.1.p [Eucalyptus grandis] (20) | \------------99-----------+ | \----- Eucgr.K01921.1.p [Eucalyptus grandis] (41) | | /----- XP_010557970.1 [Tarenaya hassleriana] (28) \-----------------99----------------+ \----- XP_010543859.1 [Tarenaya hassleriana] (33) Root part of tree: /------------------------------------------------------------------- Bostr.13129s0320.1.p [Boechera stricta] (1) | | /------- Csa13g008530.1 [Camelina sativa] (23) | | | /--100--+------- Csa08g057960.1 [Camelina sativa] (34) | | | | | \------- Csa20g008810.1 [Camelina sativa] (50) |------------------------100------------------------+ | | /------- Cagra.2117s0012.1.p [Capsella grandiflora] (27) | \--100--+ | \------- Carubv10001713m [Capsella rubella] (64) | | /---------------------------------------------------- (116) | | + | /------- GSBRNA2T00136206001 [Brassica napus] (11) | | /--100--+ | | | \------- XP_009122255.1 [Brassica rapa] (54) | | /--100-+ | | | | /------- GSBRNA2T00107041001 [Brassica napus] (16) | | | \---97--+ | /--100--+ /--100--+ \------- XP_013609327.1 [Brassica oleracea] (55) | | | | | | | | | | /------- RrC2321_p3 [Raphanus raphanistrum] (59) | | | /--100-+ \------100-----+ | | | | | \------- Rsa1.0_00553.1_g00014.1 [Raphanus sativus] (60) | | | | | | | | /--100--+ \------------------------------ 676732558 [Sisymbrium irio] (47) \--98--+ | | | | \--95--+ \------------------------------------- Tp6g36350 [Thellungiella parvula] (17) | | | \--------------------------------------------- Thhalv10014346m [Eutrema salsugineum] (66) | | /--------------- AT5G06510.1 [Arabidopsis thaliana] (10) | | \---------------------100--------------------+ /------- Araha.26186s0008.1.p [Arabidopsis halleri] (12) \--100--+ \------- 908579 [Arabidopsis lyrata] (36) |