PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Phylogenetic Tree for OGEM3008
Phylogenetic tree for protein ? help Back to Top

      Subtree rooted at node 116:

                                                                    /----- RrC875_p3 [Raphanus raphanistrum]                   (2)
                                                               /-51-+                 
                                                               |    \----- Rsa1.0_01811.1_g00005.1 [Raphanus sativus]          (46)
                                                    /----100---+                      
                                                    |          \---------- GSBRNA2T00119998001 [Brassica napus]                (67)
                                                    |                                 
                                                    |          /---------- XP_013639359.1 [Brassica oleracea]                  (8)
                                     /------59------+          |                      
                                     |              |     /-70-+    /----- GSBRNA2T00005976001 [Brassica napus]                (18)
                                     |              |     |    \-100+                 
                                     |              |     |         \----- XP_009124864.1 [Brassica rapa]                      (25)
                                     |              \-100-+                           
                                     |                    |         /----- Rsa1.0_09683.1_g00001.1 [Raphanus sativus]          (21)
                                     |                    \---100---+                 
                                     |                              \----- RrC14130_p1 [Raphanus raphanistrum]                 (39)
                                     |                                                
                                /-91-+         /-------------------------- RrC23110_p1 [Raphanus raphanistrum]                 (3)
                                |    |         |                                      
                                |    |         |                    /----- Rsa1.0_00055.1_g00053.1 [Raphanus sativus]          (43)
                                |    |         |    /-------97------+                 
                                |    |    /-100+    |               \----- RrC15896_p2 [Raphanus raphanistrum]                 (48)
                                |    |    |    |    |                                 
                                |    |    |    |    |          /---------- XP_013625432.1 [Brassica oleracea]                  (44)
                                |    |    |    \-73-+          |                      
                                |    |    |         |     /-100+    /----- GSBRNA2T00111892001 [Brassica napus]                (56)
                           /-99-+    \-50-+         |     |    \-100+                 
                           |    |         |         \-100-+         \----- GSBRNA2T00084442001 [Brassica napus]                (63)
                           |    |         |               |                           
                           |    |         |               \--------------- XP_009134849.1 [Brassica rapa]                      (61)
                           |    |         |                                           
                           |    |         \------------------------------- 676758678 [Sisymbrium irio]                         (57)
                     /-100-+    |                                                     
                     |     |    |----------------------------------------- Thhalv10021244m [Eutrema salsugineum]               (42)
                     |     |    |                                                     
                     |     |    \----------------------------------------- Tp3g04570 [Thellungiella parvula]                   (58)
                     |     |                                                          
                     |     \---------------------------------------------- KFK37976.1 [Arabis alpina]                          (5)
                     |                                                                
                     |                                              /----- Araha.24789s0002.1.p [Arabidopsis halleri]          (4)
                /-100+                                         /-100+                 
                |    |                                         |    \----- 477862 [Arabidopsis lyrata]                         (52)
                |    |                         /------100------+                      
                |    |                         |               \---------- AT3G05690.1 [Arabidopsis thaliana]                  (53)
                |    |                         |                                      
                |    |                         |                    /----- Csa15g007070.1 [Camelina sativa]                    (7)
                |    |                         |               /-100+                 
                |    |                         |               |    \----- Csa19g008200.1 [Camelina sativa]                    (24)
                |    \-----------100-----------+          /-100+                      
           /-100+                              |          |    \---------- Csa01g006590.1 [Camelina sativa]                    (37)
           |    |                              |    /-100-+                           
           |    |                              |    |     |         /----- Cagra.2108s0005.1.p [Capsella grandiflora]          (29)
           |    |                              |    |     \---100---+                 
           |    |                              \-100+               \----- Carubv10014086m [Capsella rubella]                  (40)
           |    |                                   |                                 
           |    |                                   \--------------------- Bostr.2570s0105.1.p [Boechera stricta]              (31)
           |    |                                                                     
           |    \--------------------------------------------------------- AA10G00050 [Aethionema arabicum]                    (6)
           |                                                                          
           |                                                        /----- Ciclev10012232m [Citrus clementina]                 (9)
           |                                                   /-100+                 
           |                                                   |    \----- orange1.1g021081m [Citrus sinensis]                 (35)
           |                         /-----------100-----------+                      
           |                         |                         |    /----- Neem_9117_f_3 [Azadirachta indica]                  (14)
           |                         |                         \-100+                 
           |                         |                              \----- Neem_29677_f_1 [Azadirachta indica]                 (65)
           |                         |                                                
           |                         |                         /---------- Gorai.009G394400.1 [Gossypium raimondii]            (13)
      --100+                         |                         |                      
           |                         |                    /-100+    /----- Cotton_A_16018_BGI-A2_v1.0 [Gossypium arboreum]     (26)
           |                         |                    |    \-100+                 
           |                         |              /--72-+         \----- Gh_A04G0462 [Gossypium hirsutum]                    (32)
           |                         |              |     |                           
           |                         |              |     \--------------- Thecc1EG022984t1 [Theobroma cacao]                  (62)
           |                         |              |                                 
           |                    /-100+              |               /----- Cotton_A_29133_BGI-A2_v1.0 [Gossypium arboreum]     (15)
           |                    |    |              |          /-78-+                 
           |                    |    |         /-100+          |    \----- Gh_A11G2828 [Gossypium hirsutum]                    (45)
           |                    |    |         |    |     /-100+                      
           |                    |    |         |    |     |    |    /----- Gh_D11G3183 [Gossypium hirsutum]                    (38)
           |                    |    |         |    |     |    \-100+                 
           |                    |    |         |    |     |         \----- Gorai.007G363800.1 [Gossypium raimondii]            (51)
           |                    |    |         |    \--98-+                           
           |                    |    |    /-87-+          |    /---------- Gh_A01G1710 [Gossypium hirsutum]                    (19)
           |                    |    |    |    |          |    |                      
           |                    |    |    |    |          \-100+    /----- Gorai.002G234400.1 [Gossypium raimondii]            (30)
           \---------100--------+    |    |    |               \-100+                 
                                |    |    |    |                    \----- Gh_D01G1961 [Gossypium hirsutum]                    (49)
                                |    \-98-+    |                                      
                                |         |    \-------------------------- evm.model.supercontig_104.9 [Carica papaya]         (22)
                                |         |                                           
                                |         |                         /----- Eucgr.A02570.1.p [Eucalyptus grandis]               (20)
                                |         \------------99-----------+                 
                                |                                   \----- Eucgr.K01921.1.p [Eucalyptus grandis]               (41)
                                |                                                     
                                |                                   /----- XP_010557970.1 [Tarenaya hassleriana]               (28)
                                \-----------------99----------------+                 
                                                                    \----- XP_010543859.1 [Tarenaya hassleriana]               (33)
                                                                                      
      Root part of tree:

      /------------------------------------------------------------------- Bostr.13129s0320.1.p [Boechera stricta]             (1)
      |                                                                               
      |                                                           /------- Csa13g008530.1 [Camelina sativa]                    (23)
      |                                                           |                   
      |                                                   /--100--+------- Csa08g057960.1 [Camelina sativa]                    (34)
      |                                                   |       |                   
      |                                                   |       \------- Csa20g008810.1 [Camelina sativa]                    (50)
      |------------------------100------------------------+                           
      |                                                   |       /------- Cagra.2117s0012.1.p [Capsella grandiflora]          (27)
      |                                                   \--100--+                   
      |                                                           \------- Carubv10001713m [Capsella rubella]                  (64)
      |                                                                               
      |              /---------------------------------------------------- (116)
      |              |                                                                
      +              |                                            /------- GSBRNA2T00136206001 [Brassica napus]                (11)
      |              |                                    /--100--+                   
      |              |                                    |       \------- XP_009122255.1 [Brassica rapa]                      (54)
      |              |                             /--100-+                           
      |              |                             |      |       /------- GSBRNA2T00107041001 [Brassica napus]                (16)
      |              |                             |      \---97--+                   
      |      /--100--+                     /--100--+              \------- XP_013609327.1 [Brassica oleracea]                  (55)
      |      |       |                     |       |                                  
      |      |       |                     |       |              /------- RrC2321_p3 [Raphanus raphanistrum]                  (59)
      |      |       |              /--100-+       \------100-----+                   
      |      |       |              |      |                      \------- Rsa1.0_00553.1_g00014.1 [Raphanus sativus]          (60)
      |      |       |              |      |                                          
      |      |       |      /--100--+      \------------------------------ 676732558 [Sisymbrium irio]                         (47)
      \--98--+       |      |       |                                                 
             |       \--95--+       \------------------------------------- Tp6g36350 [Thellungiella parvula]                   (17)
             |              |                                                         
             |              \--------------------------------------------- Thhalv10014346m [Eutrema salsugineum]               (66)
             |                                                                        
             |                                            /--------------- AT5G06510.1 [Arabidopsis thaliana]                  (10)
             |                                            |                           
             \---------------------100--------------------+       /------- Araha.26186s0008.1.p [Arabidopsis halleri]          (12)
                                                          \--100--+                   
                                                                  \------- 908579 [Arabidopsis lyrata]                         (36)