PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM3004
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Subtree rooted at node 107: /----- GSBRNA2T00034871001 [Brassica napus] (2) /---100---+ | \----- XP_009149243.1 [Brassica rapa] (51) | /-100-+ /---------- GSBRNA2T00034870001 [Brassica napus] (25) | | | | \-100+ /----- XP_013613976.1 [Brassica oleracea] (35) /-100+ \-100+ | | \----- GSBRNA2T00006479001 [Brassica napus] (43) | | /-100+ \--------------------- Rsa1.0_00533.1_g00018.1 [Raphanus sativus] (13) | | | \-------------------------- 676727202 [Sisymbrium irio] (34) | | /----- GSBRNA2T00139656001 [Brassica napus] (4) | /----94---+ /-98-+ | \----- XP_013601964.1 [Brassica oleracea] (53) | | | | | /-100-+ /----- XP_009110376.1 [Brassica rapa] (11) | | | | /-90-+ | | | | | \----- GSBRNA2T00102965001 [Brassica napus] (58) /-100+ \---100---+ \-94-+ | | | \---------- GSBRNA2T00074265001 [Brassica napus] (24) | | | | | \--------------------- RrC1476_p2 [Raphanus raphanistrum] (9) /-100+ | | | \------------------------------------ Tp1g15990 [Thellungiella parvula] (27) | | | \----------------------------------------- Thhalv10006969m [Eutrema salsugineum] (42) | | /----- Cagra.2175s0023.1.p [Capsella grandiflora] (14) | /-100+ /-100-+ | \----- Carubv10008485m [Capsella rubella] (63) | | /-100+ | | | | /----- Csa17g023690.1 [Camelina sativa] (44) | | | \-100+ | | /-100-+ \----- Csa03g021740.1 [Camelina sativa] (46) /-100+ | | | | | \-----------100----------+ \--------------- Bostr.7128s0399.1.p [Boechera stricta] (64) | | | | | \--------------------- AT1G17920.1 [Arabidopsis thaliana] (16) | | | \---------------------------------------------------- AA39G00087 [Aethionema arabicum] (40) | | /----- EcC054892.60 [Eucalyptus camaldulensis] (5) | /---------100--------+ | | \----- Eucgr.H00609.1.p [Eucalyptus grandis] (31) | | | | /----- Eucgr.F02903.1.p [Eucalyptus grandis] (7) | /-72-+ /------100------+ | | | | \----- EcC055180.10 [Eucalyptus camaldulensis] (52) | | | | | | | | /----- Neem_19880_f_1 [Azadirachta indica] (32) | | \-100+ /-100+ | | | | \----- Neem_9748_f_1 [Azadirachta indica] (59) | | | /-100+ /-100+ | | | \---------- Ciclev10006467m [Citrus clementina] (41) | | | \-100-+ | | | \--------------- Thecc1EG017892t1 [Theobroma cacao] (60) | | /-83-+ | | | | /----- Gorai.008G293300.1 [Gossypium raimondii] (22) | | | | /-98-+ | | | | | \----- Gh_D12G2590 [Gossypium hirsutum] (39) | | | |---------100--------+ | | | | | /----- Cotton_A_01469_BGI-A2_v1.0 [Gossypium arboreum] (57) | | | | \-100+ | | /-95-+ | \----- Gh_A12G2462 [Gossypium hirsutum] (62) | | | | | | | | | \------------------------------- Thecc1EG044944t1 [Theobroma cacao] (45) --100+ | | | | | | | /----- Neem_11530_f_2 [Azadirachta indica] (6) | | /-100+ | /-100+ | | | | | | \----- Neem_28382_f_1 [Azadirachta indica] (61) | | | | \-----------100-----------+ | | | | \---------- Ciclev10019153m [Citrus clementina] (17) | \----87----+ | | | \----------------------------------------- evm.model.supercontig_7.137 [Carica papaya] (18) | | | | /----- XP_010540042.1 [Tarenaya hassleriana] (26) | \-------------------100------------------+ | \----- XP_010537520.1 [Tarenaya hassleriana] (38) | \-------------------------------------------------------------- AA31G00615 [Aethionema arabicum] (19) Root part of tree: /------------------------------------------------------------------- Rsa1.0_06168.1_g00001.1 [Raphanus sativus] (1) | | /------ GSBRNA2T00099502001 [Brassica napus] (8) | /-100+ | | \------ XP_009104812.1 [Brassica rapa] (54) |--------------------------100--------------------------+ | | /------ XP_013588523.1 [Brassica oleracea] (15) | \-100+ | \------ GSBRNA2T00049089001 [Brassica napus] (37) | | /--------------------------------- (107) | | | | /------ Csa07g040550.1 [Camelina sativa] (3) | | /-93-+ | | | \------ Csa09g077920.1 [Camelina sativa] (10) | | /-100-+ | | | \----------- Csa16g036070.1 [Camelina sativa] (56) | /--99-+ /-100+ | | | | | /------ Carubv10021491m [Capsella rubella] (21) + | | | \----100---+ | | | /-100-+ \------ Cagra.4894s0014.1.p [Capsella grandiflora] (36) | | | | | | | | | \---------------------- Bostr.10273s0021.1.p [Boechera stricta] (49) | /-100-+ \-100+ | | | | /------ AT1G73360.1 [Arabidopsis thaliana] (50) | | | \---------100---------+ | | | \------ Araha.38479s0007.1.p [Arabidopsis halleri] (55) | /-100+ | | | | \--------------------------------------- KFK41777.1 [Arabis alpina] (23) | | | | /--76-+ \--------------------------------------------- Thhalv10018189m [Eutrema salsugineum] (30) | | | | /-100+ \-------------------------------------------------- Tp5g28290 [Thellungiella parvula] (29) | | | | | \-------------------------------------------------------- 676751386 [Sisymbrium irio] (12) | | | | /------ GSBRNA2T00102644001 [Brassica napus] (20) \-100-+ /-100+ | | \------ XP_009105998.1 [Brassica rapa] (65) | /-100-+ | | | /------ GSBRNA2T00103415001 [Brassica napus] (28) | | \-100+ \--------------------100--------------------+ \------ XP_013592873.1 [Brassica oleracea] (47) | | /------ RrC1605_p5 [Raphanus raphanistrum] (33) \----100---+ \------ Rsa1.0_02683.1_g00005.1 [Raphanus sativus] (48) |