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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2353
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Subtree rooted at node 82: /--------------------------------------------------------- evm.model.supercontig_17.155 [Carica papaya] (3) | | /---------- Csa01g022890.1 [Camelina sativa] (7) | | | /-99-+ /----- Csa15g027910.1 [Camelina sativa] (12) | | \-98-+ | /--79-+ \----- Csa19g027580.1 [Camelina sativa] (43) | | | | /-97-+ \--------------- Bostr.19424s0675.1.p [Boechera stricta] (10) | | | | | \--------------------- Cagra.0316s0082.1.p [Capsella grandiflora] (29) | | | /-100+ /----- Araha.54322s0002.1.p [Arabidopsis halleri] (15) | | |---------100--------+ | | | \----- 479503 [Arabidopsis lyrata] (48) | /-100+ | /-100+ | | \-------------------------- AT3G19860.2 [Arabidopsis thaliana] (35) | | | | | | /-100+ \------------------------------- AA26G00655 [Aethionema arabicum] (33) | | | | | | | \------------------------------------ Thhalv10021271m [Eutrema salsugineum] (38) | | | | | | /----- GSBRNA2T00054328001 [Brassica napus] (18) | | | /-99-+ | | /-99-+ | \----- XP_013615991.1 [Brassica oleracea] (49) | | | |--------------100-------------+ | | | | | /----- XP_009111465.1 [Brassica rapa] (37) | | | | \-100+ | | /-100-+ | \----- GSBRNA2T00074427001 [Brassica napus] (44) --89-+ | | | | | | | | \----------------------------------------- Tp3g17880 [Thellungiella parvula] (31) | \-100+ | | | \---------------------------------------------- Thhalv10023630m [Eutrema salsugineum] (54) | | | \---------------------------------------------------- XP_010526564.1 [Tarenaya hassleriana] (56) | | /----- Ciclev10028782m [Citrus clementina] (20) | /------100------+ | | \----- orange1.1g022288m [Citrus sinensis] (62) | | | | /----- Gh_D02G2226 [Gossypium hirsutum] (27) | | /-91-+ \-------------------100------------------+ | \----- Gorai.005G252200.1 [Gossypium raimondii] (41) | | | /-100+---------- Gh_A03G1793 [Gossypium hirsutum] (30) | | | \-100-+ \---------- Cotton_A_00658_BGI-A2_v1.0 [Gossypium arboreum] (51) | \--------------- Thecc1EG006692t1 [Theobroma cacao] (42) Root part of tree: /------------------------------------------------------------------- evm.model.supercontig_6.255 [Carica papaya] (1) | | /----------- (82) | | |--------------------------100--------------------------+ /------ EcC041121.50 [Eucalyptus camaldulensis] (34) | \-100+ | \------ Eucgr.G01757.1.p [Eucalyptus grandis] (58) | | /----------------- Thecc1EG000204t1 [Theobroma cacao] (4) | | | | /------ Cotton_A_01558_BGI-A2_v1.0 [Gossypium arboreum] (5) | | /-100+ | | | \------ Gh_A02G1636 [Gossypium hirsutum] (45) | |-100-+ | | | /------ Gh_D03G0086 [Gossypium hirsutum] (25) | /-100+ \-100+ | | | \------ Gorai.003G009400.1 [Gossypium raimondii] (57) | | | | | | /------ Gh_A11G1614 [Gossypium hirsutum] (6) | | | /-100+ | | | | \------ Cotton_A_19366_BGI-A2_v1.0 [Gossypium arboreum] (26) |---------------------88---------------------+ \-100-+ | | | /------ Gh_D11G1773 [Gossypium hirsutum] (14) | | \-80-+ | | \------ Gorai.007G194400.1 [Gossypium raimondii] (23) | | | \---------------------- Neem_4117_f_1 [Azadirachta indica] (16) | | /----------- Csa12g007340.1 [Camelina sativa] (2) | | | /-100-+ /------ Csa12g006310.1 [Camelina sativa] (32) | | \-82-+ | | \------ Csa11g005630.1 [Camelina sativa] (60) | /-76-+ | | | /------ Carubv10006934m [Capsella rubella] (9) | | \----100---+ + /-100-+ \------ Cagra.2236s0005.1.p [Capsella grandiflora] (36) | | | | | \---------------------- Bostr.7867s1468.1.p [Boechera stricta] (22) | /-------100------+ | | | /----------- Araha.35519s0001.1.p [Arabidopsis halleri] (13) | | | | | | \-------100------+ /------ AT4G36060.1 [Arabidopsis thaliana] (40) | | \-92-+ | | \------ 491027 [Arabidopsis lyrata] (59) | | | | /------ GSBRNA2T00086660001 [Brassica napus] (8) | | /-100+ | | | \------ XP_009138406.1 [Brassica rapa] (24) | | /-100-+ | | | | /------ XP_013596284.1 [Brassica oleracea] (21) | | | \-100+ | | /-100+ \------ GSBRNA2T00100112001 [Brassica napus] (39) | /-100+ | | | | | | | /------ Rsa1.0_00269.1_g00028.1 [Raphanus sativus] (19) | | | | \----100---+ | | | | \------ RrC16619_p1 [Raphanus raphanistrum] (28) | | | /--97-+ | | | | | /------ GSBRNA2T00074199001 [Brassica napus] (46) | | | | | /-100+ | | | | | | \------ XP_013594363.1 [Brassica oleracea] (52) | | | /-97-+ \----100---+ | /-100-+ | | | \----------- XP_009147595.1 [Brassica rapa] (53) | | | | | | | | | | /--93-+ \---------------------------- Tp7g33840 [Thellungiella parvula] (50) | | | | | | | | | \--93-+ \--------------------------------- Thhalv10026039m [Eutrema salsugineum] (61) | /-100+ | | | | | | \--------------------------------------- KFK30238.1 [Arabis alpina] (17) | | | | | | | \-------------------------------------------------- AA30G00129 [Aethionema arabicum] (11) \--51-+ | | \-------------------------------------------------------- XP_010548277.1 [Tarenaya hassleriana] (47) | \------------------------------------------------------------- Eucgr.I02346.1.p [Eucalyptus grandis] (55) |