PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2220
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 127: /----- Gorai.012G054300.1 [Gossypium raimondii] (2) /-82-+ | \----- Gh_D04G0444 [Gossypium hirsutum] (31) /-100+ | \---------- Cotton_A_19854_BGI-A2_v1.0 [Gossypium arboreum] (16) | | /----- Gh_A09G0154 [Gossypium hirsutum] (38) /--93-+ /-100+ | | | \----- Cotton_A_30610_BGI-A2_v1.0 [Gossypium arboreum] (44) | | | | \-100+---------- Gh_D09G0146 [Gossypium hirsutum] (51) /-100+ | | | \---------- Gorai.006G017200.1 [Gossypium raimondii] (75) | | /-100+ \--------------------- Thecc1EG018552t1 [Theobroma cacao] (29) | | | | /----- orange1.1g016972m [Citrus sinensis] (27) /---------100--------+ \---------100--------+ | | \----- Ciclev10011968m [Citrus clementina] (67) | | | \------------------------------- evm.model.supercontig_140.55 [Carica papaya] (30) | | /----- RrC12344_p1 [Raphanus raphanistrum] (7) | /---100---+ | | \----- Rsa1.0_00387.1_g00032.1 [Raphanus sativus] (33) | | | /-100-+ /----- XP_009151829.1 [Brassica rapa] (8) | | | /-100+ | | | | \----- GSBRNA2T00144536001 [Brassica napus] (15) | | \-95-+ | | | /----- XP_013599446.1 [Brassica oleracea] (47) | | \-99-+ | | \----- GSBRNA2T00142868001 [Brassica napus] (61) | /-100+ | | | /----- GSBRNA2T00109603001 [Brassica napus] (50) | | | /-72-+ | | | | \----- XP_013607214.1 [Brassica oleracea] (58) | | | /-66-+ | /-74-+ | | \---------- GSBRNA2T00009837001 [Brassica napus] (72) /----74---+ | | \-100-+ | | | | \--------------- XP_009111615.1 [Brassica rapa] (64) | | /-95-+ | | | | | \-------------------------- Tp2g17550 [Thellungiella parvula] (26) | | | | | | /-98-+ \------------------------------- 676759574 [Sisymbrium irio] (56) | | | | | | | \------------------------------------ Thhalv10004599m [Eutrema salsugineum] (10) | | | | | | /----- Carubv10017644m [Capsella rubella] (17) | | | /---------100--------+ | | | | \----- Cagra.4191s0001.1.p [Capsella grandiflora] (21) | | | | | | /-100+ | /--------------- Bostr.0556s0541.1.p [Boechera stricta] (18) | | | | | | | | | | /-100+ | /----- AT3G28920.1 [Arabidopsis thaliana] (54) | | | | | | /--95-+ /-91-+ | | | | | | | | | \----- 484662 [Arabidopsis lyrata] (60) | | | | | | | \-99-+ | | | | | | | \---------- Araha.2482s0003.1.p [Arabidopsis halleri] (74) | | | | | \-68-+ | \-100-+ \----97---+ | /----- Csa04g018200.1 [Camelina sativa] (24) | | | | /-99-+ | | | | | \----- Csa09g021330.1 [Camelina sativa] (35) | | | \----100---+ | | | \---------- Csa06g011260.1 [Camelina sativa] (34) | | | | | \------------------------------- KFK33764.1 [Arabis alpina] (66) | | | \---------------------------------------------- AA53G01081 [Aethionema arabicum] (57) | | /---------------------------------------------- AA40G00567 [Aethionema arabicum] (3) --100+ | | | /----------------------------------------- KFK25766.1 [Arabis alpina] (4) | | | | | | /--------------------- 676789410 [Sisymbrium irio] (5) | | | | | | | | /----- XP_009121598.1 [Brassica rapa] (13) | /-100-+ | | /-100+ | | | | | | \----- GSBRNA2T00135543001 [Brassica napus] (36) | | | | /-96-+ | | | | | | | /-100+---------- XP_013614396.1 [Brassica oleracea] (28) | | | | | | | | | | | | | | | \---------- GSBRNA2T00142504001 [Brassica napus] (32) | | \-100+ | \-100-+ | | | /---100---+ | /----- Rsa1.0_04794.1_g00002.1 [Raphanus sativus] (70) | | | | | \---100---+ | | | | | \----- RrC10018_p1 [Raphanus raphanistrum] (71) | | | | | | | | | \-------------------------- Tp6g28860 [Thellungiella parvula] (68) | | | | | | | | /----- Csa20g021700.1 [Camelina sativa] (11) | | | | /-98-+ | | | | | \----- Csa08g007290.1 [Camelina sativa] (41) | /-100+ | | /-100+ | | | \-93-+ | \---------- Csa13g018040.1 [Camelina sativa] (42) | | | | /-100-+ | | | | | | /----- Cagra.1036s0035.1.p [Capsella grandiflora] (45) | | | | | \---100---+ | | | | /-99-+ \----- Carubv10003631m [Capsella rubella] (62) | | | | | | | | | | | \--------------------- Bostr.2902s0256.1.p [Boechera stricta] (14) | | | | /-99-+ | | | | | |-------------------------- AT5G15210.1 [Arabidopsis thaliana] (69) \-80-+ | | | | | | \-100+ \-------------------------- 488363 [Arabidopsis lyrata] (73) | | | | | \------------------------------- Thhalv10016088m [Eutrema salsugineum] (12) | | | | /----- XP_010550055.1 [Tarenaya hassleriana] (6) | \----------------------100---------------------+ | \----- XP_010551857.1 [Tarenaya hassleriana] (49) | \--------------------------------------------------------- XP_010552878.1 [Tarenaya hassleriana] (20) Root part of tree: /------------------------------------------------------------------- Rsa1.0_05375.1_g00002.1 [Raphanus sativus] (1) | |------------------------------------------------------------------- RrC29477_p1 [Raphanus raphanistrum] (55) | | /------ (127) | /----------100----------+ | | \------ AA9G00043 [Aethionema arabicum] (23) | | | | /------ 494014 [Arabidopsis lyrata] (19) | | /-------100-------+ | /--91--+ | \------ AT5G39760.1 [Arabidopsis thaliana] (53) | | | | | | | | /------ Csa11g055790.1 [Camelina sativa] (22) | | | | | | | \-100-+ /-100-+------ Csa10g046780.1 [Camelina sativa] (43) + | | | | | /--96-+ | /--97-+ \------ Csa12g081670.1 [Camelina sativa] (46) | | | | | | | | | \--91-+ \------------ Carubv10007269m [Capsella rubella] (40) | | | | | /-100-+ | \------------------ Bostr.10058s0024.1.p [Boechera stricta] (59) | | | | | | | \------------------------------------- KFK26902.1 [Arabis alpina] (9) | /-100-+ | | | | \------------------------------------------- Thhalv10028098m [Eutrema salsugineum] (25) | | | | /--61-+ \------------------------------------------------- Tp7g02270 [Thellungiella parvula] (52) | | | | | \------------------------------------------------------- 676729886 [Sisymbrium irio] (37) | | \-100-+ /------ GSBRNA2T00114284001 [Brassica napus] (39) | /-100-+ | | \------ XP_009139922.1 [Brassica rapa] (48) \-----------------------100----------------------+ | /------ GSBRNA2T00017701001 [Brassica napus] (63) \-100-+ \------ XP_013631916.1 [Brassica oleracea] (65) |