PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2043
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 121: /----- 487890 [Arabidopsis lyrata] (2) /-100+ | \----- Araha.2597s0029.1.p [Arabidopsis halleri] (34) /----100---+ | \---------- AT5G10570.1 [Arabidopsis thaliana] (39) | | /----- Csa20g015900.1 [Camelina sativa] (22) /-100+ /-100+ | | | \----- Csa13g013340.1 [Camelina sativa] (49) | | /-70-+ | | | \---------- Bostr.13175s0042.1.p [Boechera stricta] (53) | \-100-+ | | /----- Carubv10001486m [Capsella rubella] (41) | \---100---+ | \----- Cagra.1085s0002.1.p [Capsella grandiflora] (54) | /-68-+ /----- RrC2433_p6 [Raphanus raphanistrum] (6) | | /---100---+ | | | \----- Rsa1.0_00907.1_g00010.1 [Raphanus sativus] (10) | | | | | /-100-+ /----- XP_009122040.1 [Brassica rapa] (8) | | | | /-100+ | | | | | \----- GSBRNA2T00135878001 [Brassica napus] (12) | | | \-100+ /-----------100-----------+ | | | /----- XP_013609563.1 [Brassica oleracea] (35) | | \-100+ \-100+ | | | \----- GSBRNA2T00103989001 [Brassica napus] (56) | | | | | | /----- Tp6g32860 [Thellungiella parvula] (63) | | \-------76------+ | | \----- Thhalv10016038m [Eutrema salsugineum] (68) | | | \------------------------------- KFK23906.1 [Arabis alpina] (78) | | /----- XP_009130519.1 [Brassica rapa] (3) | /-100+ | | \----- GSBRNA2T00064787001 [Brassica napus] (37) | /-100+ | | | /----- XP_013618266.1 [Brassica oleracea] (13) | | \-97-+ | /----100---+ \----- GSBRNA2T00093985001 [Brassica napus] (65) | | | | | | /----- RrC5562_p1 [Raphanus raphanistrum] (26) | | \---100---+ | | \----- Rsa1.0_00889.1_g00006.1 [Raphanus sativus] (40) | | | | /----- Rsa1.0_03397.1_g00002.1 [Raphanus sativus] (7) | /-99-+ /---100---+ | | | | \----- RrC13565_p1 [Raphanus raphanistrum] (46) | | | | | | | /-100-+ /----- XP_009150653.1 [Brassica rapa] (11) /-100+ | | | | /-100+ | | | | | | | \----- GSBRNA2T00000704001 [Brassica napus] (77) | | /-100+ \-100+ \-100+ | | | | | \---------- XP_013622137.1 [Brassica oleracea] (23) | | | | | | | | | \--------------------- 676751916 [Sisymbrium irio] (76) | | /-97-+ | | | | | \------------------------------- Tp2g28730 [Thellungiella parvula] (24) | | | | | | | \------------------------------------ Thhalv10004732m [Eutrema salsugineum] (20) | | | | | | /---------- AT5G65640.1 [Arabidopsis thaliana] (9) | | | | | | /-100+ /------100------+ /----- 496795 [Arabidopsis lyrata] (50) | | | | | \-100+ | | | | | \----- Araha.37462s0003.1.p [Arabidopsis halleri] (75) | | | | | | | | | | /----- Carubv10026606m [Capsella rubella] (17) --100+ | | | | /---100---+ | | | \------100-----+ | \----- Cagra.0917s0023.1.p [Capsella grandiflora] (70) | | | | | | | /--99-+ | /--98-+ /----- Csa02g074670.1 [Camelina sativa] (32) | | | | | | | /-88-+ | | | | | | | | \----- Csa11g102870.1 [Camelina sativa] (74) | | | | \-97-+ \-100+ | | | | | \---------- Csa18g039460.1 [Camelina sativa] (61) | \-100+ | | | | | \--------------------- Bostr.0568s0223.1.p [Boechera stricta] (25) | | | | | \---------------------------------------------- KFK28233.1 [Arabis alpina] (38) | | | \---------------------------------------------------- AA4G00283 [Aethionema arabicum] (30) | | /----- XP_010519174.1 [Tarenaya hassleriana] (31) | /-100+ | | \----- XP_010525344.1 [Tarenaya hassleriana] (60) \------------------------100------------------------+ \---------- XP_010518919.1 [Tarenaya hassleriana] (64) Subtree rooted at node 149: /---------------------------------------------------- (121) | | /-------------------------- Thecc1EG034574t1 [Theobroma cacao] (5) | | | | /----- Gh_D05G3821 [Gossypium hirsutum] (29) | | /-100+ | | | \----- Gorai.009G226200.1 [Gossypium raimondii] (45) | /-99-+ /----100---+ | | | | | /----- Gh_A05G3762 [Gossypium hirsutum] (42) | | | | \-99-+ | | | | \----- Cotton_A_19514_BGI-A2_v1.0 [Gossypium arboreum] (51) | | \-99-+ | | | /--------------- Gh_A06G0241 [Gossypium hirsutum] (36) | | | | | /-97-+ | | /----- Gorai.010G031800.1 [Gossypium raimondii] (47) /-100+ | | \-100-+ /-100+ | | | | | | \----- Gh_D06G2316 [Gossypium hirsutum] (67) | | | | \-99-+ | | | | \---------- Cotton_A_27862_BGI-A2_v1.0 [Gossypium arboreum] (66) | | | | | | /-98-+ \------------------------------- evm.model.supercontig_177.1 [Carica papaya] (69) | | | | | | | | /----- orange1.1g018897m [Citrus sinensis] (33) | | | | /-100+ | | | | | \----- Ciclev10001683m [Citrus clementina] (71) | | /-100+ \-----------100-----------+ | | | | | /----- Neem_4737_f_1 [Azadirachta indica] (43) /-100+ | | | \-100+ | | | | | \----- Neem_36839_f_1 [Azadirachta indica] (73) | | | | | | | \-100-+ \----------------------------------------- Eucgr.F02171.1.p [Eucalyptus grandis] (72) | | | | | | /----- Eucgr.F00459.1.p [Eucalyptus grandis] (16) | | | /-77-+ | | | | \----- EcC015428.40 [Eucalyptus camaldulensis] (21) | | \----------------100----------------+ | | \---------- EcS780960.10 [Eucalyptus camaldulensis] (44) | | | \--------------------------------------------------------- Eucgr.I00608.1.p [Eucalyptus grandis] (55) | | /----- Cotton_A_29902_BGI-A2_v1.0 [Gossypium arboreum] (4) --100+ /-100+ | | \----- Gh_A02G1404 [Gossypium hirsutum] (15) | /-100+ | | | /----- Gh_D03G0317 [Gossypium hirsutum] (48) | | \-86-+ | | \----- Gorai.003G035900.1 [Gossypium raimondii] (62) | /--74-+ | | | /---------- Gh_A11G1886 [Gossypium hirsutum] (18) | | | | | | | |---------- Cotton_A_39830_BGI-A2_v1.0 [Gossypium arboreum] (27) | | \-100+ | /-100+ | /----- Gorai.007G229900.1 [Gossypium raimondii] (52) | | | \-95-+ | | | \----- Gh_D11G2082 [Gossypium hirsutum] (58) \-----------------97----------------+ | | \--------------------- Thecc1EG000915t1 [Theobroma cacao] (28) | \-------------------------- evm.model.supercontig_129.19 [Carica papaya] (57) Root part of tree: /------------------------------------------------------------------- Ciclev10025967m [Citrus clementina] (1) | |------------------------------------------------------------------- orange1.1g038389m [Citrus sinensis] (14) + | /--------------------------------------------- (149) | | \---------100---------+ /---------------------- Neem_6269_f_2 [Azadirachta indica] (19) \----------100---------+ \---------------------- Neem_26037_f_1 [Azadirachta indica] (59) |