PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1933
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 142: /-------------------------- Eucgr.E00850.1.p [Eucalyptus grandis] (2) | | /--------------- Thecc1EG016426t1 [Theobroma cacao] (6) | | | | /----- Gh_D12G2301 [Gossypium hirsutum] (13) /-95-+ /--82-+ /-100+ | | | | | \----- Gorai.008G253300.1 [Gossypium raimondii] (21) | | | \-100+ | | | | /----- Gh_A12G2121 [Gossypium hirsutum] (65) | | | \-100+ | \-100+ \----- Cotton_A_23199_BGI-A2_v1.0 [Gossypium arboreum] (81) | | | | /----- Gh_A08G2417 [Gossypium hirsutum] (16) | | /-100+ /--------------98--------------+ | | \----- Cotton_A_39979_BGI-A2_v1.0 [Gossypium arboreum] (73) | | \----100---+ | | | /----- Gorai.004G134600.1 [Gossypium raimondii] (33) | | \-100+ | | \----- Gh_D08G1232 [Gossypium hirsutum] (43) | | | | /----- Neem_9633_f_1 [Azadirachta indica] (9) | | /-100+ | | | \----- Neem_38115_f_1 [Azadirachta indica] (57) | \---------100--------+ | | /----- Ciclev10021038m [Citrus clementina] (18) | \-100+ | \----- orange1.1g019737m [Citrus sinensis] (30) | | /------------------------------- KFK28937.1 [Arabis alpina] (3) | | | | /----- Csa10g019250.1 [Camelina sativa] (14) | | /-98-+ | | | \----- Csa12g030620.1 [Camelina sativa] (71) | | /-100+ | | | \---------- Csa11g021070.1 [Camelina sativa] (45) | /-96-+ /-100-+ | | | | | /----- Carubv10006884m [Capsella rubella] (40) | | | | \---100---+ | | | /-100+ \----- Cagra.1226s0044.1.p [Capsella grandiflora] (56) | | | | | | | | | \--------------------- Bostr.7867s0183.1.p [Boechera stricta] (76) | | | | | | \-100+ /----- 492487 [Arabidopsis lyrata] (38) | | | /-100+ | | | | \----- AT4G23810.1 [Arabidopsis thaliana] (39) | | \------100------+ | /-100+ \---------- Araha.6872s0007.1.p [Arabidopsis halleri] (54) | | | | | | /------------------------------- Thhalv10025724m [Eutrema salsugineum] (8) | | | | | | | | /----- Rsa1.0_00340.1_g00007.1 [Raphanus sativus] (10) | | | | /---100---+ | | | | | \----- RrC348_p4 [Raphanus raphanistrum] (67) | | | | | | | | | /-100-+ /----- GSBRNA2T00048907001 [Brassica napus] (24) | | | | | | /-92-+ | | | | | | | \----- XP_009137392.1 [Brassica rapa] (83) | | \-95-+ | \-100+ | | | /-85-+ | /----- XP_013597887.1 [Brassica oleracea] (37) | | | | | \-100+ | | | | | \----- GSBRNA2T00157168001 [Brassica napus] (69) | | | | | | /-100+ | | \--------------------- Tp7g21770 [Thellungiella parvula] (47) | | | | | --100+ | | | | /----- XP_009137380.1 [Brassica rapa] (12) | | | | | /-100+ | | | \-100+ | \----- GSBRNA2T00087835001 [Brassica napus] (72) | | | | | | | | | /-100+---------- GSBRNA2T00116202001 [Brassica napus] (31) | | | | | | | | | | | \---------- XP_013606231.1 [Brassica oleracea] (48) | | | | /-100-+ | | | | | | /----- Rsa1.0_05893.1_g00002.1 [Raphanus sativus] (15) | | | | | \---100---+ | | | \-100+ \----- RrC9864_p2 [Raphanus raphanistrum] (74) | | | | | | | \--------------------- 676714300 [Sisymbrium irio] (61) | | | | | \----------------------------------------- AA54G00259 [Aethionema arabicum] (36) | | | | /--------------------- Bostr.25463s0219.1.p [Boechera stricta] (17) | | | | | | /----- Csa13g048200.1 [Camelina sativa] (19) | | | /-99-+ | | /-100+ | \----- Csa02g021680.1 [Camelina sativa] (59) | | | | /-100+ | /-100-+ | | | \---------- Csa08g043210.1 [Camelina sativa] (25) | | | | \--79-+ | | | | | /----- Cagra.3839s0004.1.p [Capsella grandiflora] (41) | | | | \---100---+ | | | /---100---+ \----- Carubv10001458m [Capsella rubella] (53) | | | | | | | | | | /----- 489946 [Arabidopsis lyrata] (34) | | | | | /-93-+ | | | | | | \----- Araha.32525s0001.1.p [Arabidopsis halleri] (79) | | | | \------100------+ | | | | \---------- AT4G11070.1 [Arabidopsis thaliana] (55) | | | | | | | | /----- XP_013616531.1 [Brassica oleracea] (20) | | | | /-100+ | | | | | \----- GSBRNA2T00044072001 [Brassica napus] (42) | | | /-100+ /-100+ | | | | | | | /----- XP_009128690.1 [Brassica rapa] (29) | /-100+ | | | | \-100+ | | | | | | /-100-+ \----- GSBRNA2T00029327001 [Brassica napus] (82) | | | | | | | | | | | | | | | | /----- Rsa1.0_00147.1_g00005.1 [Raphanus sativus] (23) | | | | | | /-94-+ \---100---+ | | | | | | | | \----- RrC3999_p1 [Raphanus raphanistrum] (35) | | | \-100+ | | | | | | | | /-80-+ \--------------------- 676762930 [Sisymbrium irio] (70) | | | | | | | | | | | \-100+ \-------------------------- Tp6g06380 [Thellungiella parvula] (49) \-77-+ | | | | | | \------------------------------- Thhalv10028794m [Eutrema salsugineum] (50) | | | | | \----------------------------------------- AA3G00054 [Aethionema arabicum] (52) | | | | /----- XP_010529633.1 [Tarenaya hassleriana] (27) | \----------------------99----------------------+ | \----- XP_010538824.1 [Tarenaya hassleriana] (78) | \--------------------------------------------------------- evm.model.supercontig_79.60 [Carica papaya] (22) Root part of tree: /------------------------------------------------------------------- Eucgr.K00331.1.p [Eucalyptus grandis] (1) | | /------------------------------------------ (142) | | | | /-------- Cotton_A_32020_BGI-A2_v1.0 [Gossypium arboreum] (7) | | /---100--+ | | | \-------- Gorai.001G155800.1 [Gossypium raimondii] (60) | | /--100--+ | /--100--+ | | /-------- Thecc1EG005179t1 [Theobroma cacao] (44) | | | | \---90---+ | | | /---85--+ \-------- Gh_D11G1011 [Gossypium hirsutum] (75) | | | | | | | | | | /-------- Ciclev10020744m [Citrus clementina] (26) | | \---100--+ \-------100------+ | | | \-------- orange1.1g017895m [Citrus sinensis] (62) | | | | | \--------------------------------- Eucgr.D02359.1.p [Eucalyptus grandis] (63) | | | /---100--+ /-------- Ciclev10005165m [Citrus clementina] (4) | | | /---100--+ | | | | \-------- orange1.1g045032m [Citrus sinensis] (11) + | | /--100--+ | | | | | /-------- Neem_38832_f_1 [Azadirachta indica] (28) | | | | \---100--+ | | | /---97--+ \-------- Neem_17452_f_1 [Azadirachta indica] (51) | | | | | | | | | \------------------------- evm.model.supercontig_3.53 [Carica papaya] (77) | | | | |--100--+ \-------89-------+ /------------------------- Thecc1EG015346t1 [Theobroma cacao] (32) | | | | | | | | /-------- Gh_A11G0118 [Gossypium hirsutum] (46) | | \--100--+ /---99---+ | | | | \-------- Cotton_A_02399_BGI-A2_v1.0 [Gossypium arboreum] (68) | | | | | | \--100--+----------------- Gh_D11G0132 [Gossypium hirsutum] (64) | | | | | \----------------- Gorai.007G014600.1 [Gossypium raimondii] (66) | | | \----------------------------------------------------------- Eucgr.G00268.1.p [Eucalyptus grandis] (80) | | /-------- Eucgr.G00254.1.p [Eucalyptus grandis] (5) \----------------------------100---------------------------+ \-------- Eucgr.G00258.1.p [Eucalyptus grandis] (58) |