PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEA681
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Subtree rooted at node 177: /--------------------------------------------------- Itr_sc005173.1_g00002.1 [Ipomoea trifida] (5) | | /----- PGSC0003DMP400014817 [Solanum tuberosum] (7) | /-100+ | | \----- Sopen05g032650.1 [Solanum pennellii] (61) | /-100+ | | \---------- Sme2.5_05200.1_g00006.1 [Solanum melongena] (12) | /-100+ | | \--------------- CA05g17900 [Capsicum annuum] (92) | | | | /----- XP_016490832.1 [Nicotiana tabacum] (11) | /-92-+ /---100---+ | | | | \----- XP_009629634.1 [Nicotiana tomentosiformis] (97) | | | | | | \-100+ /---------- Niben101Scf02911g07002.1 [Nicotiana benthamiana] (50) | | | | | /------100------+ \-82-+ /----- XP_009804066.1 [Nicotiana sylvestris] (87) | | | \-100+ | | | \----- XP_016451629.1 [Nicotiana tabacum] (88) | | | | | | /----- Peaxi162Scf00576g00063.1 [Petunia axillaris] (47) | | \--------100--------+ | | \----- Peinf101Scf03187g02004.1 [Petunia inflata] (96) | | | | /----- Sopim04g014830.0.1 [Solanum pimpinellifolium] (9) /-99-+ | /-100+ | | | | \----- Solyc04g014830.1.1 [Solanum lycopersicum] (180) | | | /-100+ | | | | \---------- Sopen04g006960.1 [Solanum pennellii] (53) | | /-100+ /-100+ | | | | | \--------------- PGSC0003DMP400040771 [Solanum tuberosum] (99) | | | | /-100+ | | | | | \-------------------- Sme2.5_03957.1_g00007.1 [Solanum melongena] (31) | | | | /-100+ | | | | | \------------------------- CA05g01670 [Capsicum annuum] (29) | | | | | | | | | | /----- XP_016460679.1 [Nicotiana tabacum] (26) | | | | /--95-+ /---100---+ | | | | | | | \----- XP_009594270.1 [Nicotiana tomentosiformis] (72) | | | | | | | | | | | | \------100-----+ /----- XP_009792736.1 [Nicotiana sylvestris] (37) | | | | | | /-100+ | | | \-100+ | | \----- XP_016448345.1 [Nicotiana tabacum] (150) | | | | \-100+ | | | | \---------- Niben101Scf02048g00001.1 [Nicotiana benthamiana] (64) | | | | | | | | /----- Peinf101Scf01292g05002.1 [Petunia inflata] (39) | | | \--------------100-------------+ | | | \----- Peaxi162Scf00520g00001.1 [Petunia axillaris] (40) | \-99-+ | | /----- XP_009773976.1 [Nicotiana sylvestris] (13) | | /-100+ /-100+ | | \----- XP_016483598.1 [Nicotiana tabacum] (55) | | | /-86-+ | | | | | /----- Niben101Scf01234g01012.1 [Nicotiana benthamiana] (23) | | | | \-100+ | | | | \----- Niben101Scf03541g00022.1 [Nicotiana benthamiana] (34) | | | | | | | /-69-+ /----- XP_009625296.1 [Nicotiana tomentosiformis] (68) | | | | |----99---+ | | | | | \----- XP_016487801.1 [Nicotiana tabacum] (110) | | | /----99---+ | | | | | | \--------------- Niben101Scf04993g05001.1 [Nicotiana benthamiana] (140) | | | | | | | | | \-------------------- Niben101Scf04993g06012.1 [Nicotiana benthamiana] (20) | | | | | | | | /---------- Sopen11g007250.1 [Solanum pennellii] (22) | | | | | | | \------100------+ /-100+ /----- Sopim11g012510.0.1 [Solanum pimpinellifolium] (33) | | | | \-100+ | | | /-100+ \----- Solyc11g012510.1.1 [Solanum lycopersicum] (65) | | | | | | | | /-100+ \--------------- PGSC0003DMP400023644 [Solanum tuberosum] (86) | | | | | | | \-100+ \-------------------- Sme2.5_01424.1_g00007.1 [Solanum melongena] (73) | | | | | \------------------------- CA12g00700 [Capsicum annuum] (89) --97-+ | | \-------------------------------------------------------- Itr_sc006078.1_g00001.1 [Ipomoea trifida] (35) | | /----- SMil_00023920-RA_Salv [Salvia miltiorrhiza] (8) | /-100+ | | \----- Ote100177760031 [Ocimum tenuiflorum] (120) | /-100+ | | \---------- Migut.H01617.1.p [Mimulus guttatus] (98) | /----86---+ | | \--------------- XP_011086251.1 [Sesamum indicum] (100) | | | | /---------- 678417385 [Utricularia gibba] (17) | | | | | /-100+ /----- EPS70356.1 [Genlisea aurea] (70) | /-78-+ | \-99-+ | | | /-84-+ \----- 678464754 [Utricularia gibba] (76) | | | | | | | | | \--------------- XP_011095941.1 [Sesamum indicum] (71) | | | | | | \-99-+ /----- Ote100005680061 [Ocimum tenuiflorum] (49) | /-100-+ | /-100+ | | | | | \----- SMil_00022108-RA_Salv [Salvia miltiorrhiza] (82) | | | \----86---+ | | | \---------- Migut.M01421.1.p [Mimulus guttatus] (95) | | | \-----------95-----------+ | /----- KZV41449.1 [Dorcoceras hygrometricum] (30) | \-----------66-----------+ | \----- KZV51240.1 [Dorcoceras hygrometricum] (42) | | /----- Cc09_g00640 [Coffea canephora] (75) \--------------100-------------+ \----- cra_locus_1993_iso_1 [Catharanthus roseus] (170) Subtree rooted at node 200: /---------- (177) | /-85-+ /----- Achn341111 [Actinidia chinensis] (10) | \-100+ | \----- Achn142571 [Actinidia chinensis] (160) /---------------------100---------------------+ | | /----- DCAR_004891 [Daucus carota] (45) | \---100---+ | \----- DCAR_027820 [Daucus carota] (85) | | /----- Achn332821 [Actinidia chinensis] (6) | /------------------------100-----------------------+ | | \----- Achn305931 [Actinidia chinensis] (25) | | | | /---------- Sopen07g033480.1 [Solanum pennellii] (15) | | | | | /-100+ /----- Solyc07g065270.1.1 [Solanum lycopersicum] (67) --100+ | | \-100+ | | /-100+ \----- Sopim07g065270.0.1 [Solanum pimpinellifolium] (94) | | | | | | /-100+ \--------------- PGSC0003DMP400038400 [Solanum tuberosum] (36) | | | | | | /-100+ \-------------------- Sme2.5_00100.1_g00011.1 [Solanum melongena] (90) | | | | | | | \------------------------- CA07g20170 [Capsicum annuum] (84) | | | | | /--78-+ /----- XP_016475371.1 [Nicotiana tabacum] (44) | | | | /---100---+ \-100+ | | | \----- XP_009626207.1 [Nicotiana tomentosiformis] (81) | | | | | | \------100-----+ /---------- Niben101Scf08811g00005.1 [Nicotiana benthamiana] (54) | | | | | | | | /----- XP_016487146.1 [Nicotiana tabacum] (57) | /-100+ \-100+-100+ | | | | \----- XP_009804325.1 [Nicotiana sylvestris] (69) | | | | | | | \---------- Niben101Scf00683g00016.1 [Nicotiana benthamiana] (58) | | | | /-100+ | /----- Peinf101Scf00022g02006.1 [Petunia inflata] (16) | | | \--------------100-------------+ | | | \----- Peaxi162Scf00285g00084.1 [Petunia axillaris] (62) | /-72-+ | | | | \----------------------------------------- Itr_sc000349.1_g00015.1 [Ipomoea trifida] (46) | | | \-68-+ \---------------------------------------------- XP_011097791.1 [Sesamum indicum] (190) | | /----- DCAR_017092 [Daucus carota] (52) \---------------------100---------------------+ \----- DCAR_013212 [Daucus carota] (91) Subtree rooted at node 213: /---------- XP_016485416.1 [Nicotiana tabacum] (2) | /-100+ /----- XP_009590821.1 [Nicotiana tomentosiformis] (18) | \-100+ /-90-+ \----- XP_016510453.1 [Nicotiana tabacum] (28) | | /-----------100-----------+ \--------------- XP_009761823.1 [Nicotiana sylvestris] (66) | | | \-------------------- Niben101Scf01943g11007.1 [Nicotiana benthamiana] (38) | | /----- cra_locus_10464_iso_1 [Catharanthus roseus] (3) | /-----------100----------+ | | \----- Cc00_g06820 [Coffea canephora] (130) | | | | /------------------------- KZV31351.1 [Dorcoceras hygrometricum] (24) | /--97-+ | | | | | /----- Ote100032450011 [Ocimum tenuiflorum] (41) /-100+ | | | /-100+ | | | | | | \----- Ote100263640041 [Ocimum tenuiflorum] (111) | | | \-100+ /-100+ | | | | | \---------- SMil_00020530-RA_Salv [Salvia miltiorrhiza] (110) | | | | /-100+ | | /-69-+ | | \--------------- Migut.M00028.1.p [Mimulus guttatus] (93) | | | | \-100+ | | | | \-------------------- XP_011100624.1 [Sesamum indicum] (74) | | | | | | | | /---------- Itr_sc000168.1_g00012.1 [Ipomoea trifida] (4) | | | | | /-100+ \-100+ \------------55-----------+ /----- Itr_sc000041.1_g00016.1 [Ipomoea trifida] (27) | | | \-89-+ | | | \----- Itr_sc000110.1_g00021.1 [Ipomoea trifida] (77) | | | | | | /---------- (200) | | | | | | \--------------100-------------+ /----- Achn052901 [Actinidia chinensis] (51) | | \-82-+ | | \----- DCAR_021107 [Daucus carota] (80) | | /-100+ | /----- Peinf101Scf03171g03003.1 [Petunia inflata] (21) | | \---------------------100---------------------+ | | \----- Peaxi162Scf00776g00311.1 [Petunia axillaris] (83) | | | | /----- Niben101Scf10048g00002.1 [Nicotiana benthamiana] (14) | | /-56-+ | | | \----- Niben101Scf25596g00004.1 [Nicotiana benthamiana] (19) | | /-99-+ --100+ | | | /----- XP_009784447.1 [Nicotiana sylvestris] (32) | | | \-100+ | \-------------------100------------------+ \----- XP_016458356.1 [Nicotiana tabacum] (60) | | | | /----- XP_009605526.1 [Nicotiana tomentosiformis] (48) | \---100---+ | \----- XP_016478621.1 [Nicotiana tabacum] (79) | \------------------------------------------------------------- CA07g10940 [Capsicum annuum] (78) Root part of tree: /------------------------------------------------------------------ Solyc07g047950.1.1 [Solanum lycopersicum] (1) | |------------------------------------------------------------------ Sopim07g047950.0.1 [Solanum pimpinellifolium] (56) | | /---------------- (213) + /-------100------+ | | \---------------- Sme2.5_02954.1_g00005.1 [Solanum melongena] (43) | /------100------+ | | \--------------------------------- PGSC0003DMP400010871 [Solanum tuberosum] (63) \-------100------+ \------------------------------------------------- Sopen07g024380.1 [Solanum pennellii] (59) 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