PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Rubus occidentalis
B3 Family
Species TF ID Description
Ro01_G03185B3 family protein
Ro01_G10769B3 family protein
Ro01_G10814B3 family protein
Ro01_G19946B3 family protein
Ro01_G23896B3 family protein
Ro01_G26756B3 family protein
Ro01_G29695B3 family protein
Ro01_G29696B3 family protein
Ro01_G30224B3 family protein
Ro01_G30225B3 family protein
Ro01_G30283B3 family protein
Ro02_G00623B3 family protein
Ro02_G01470B3 family protein
Ro02_G01609B3 family protein
Ro02_G02437B3 family protein
Ro02_G02467B3 family protein
Ro02_G06605B3 family protein
Ro02_G16401B3 family protein
Ro02_G16402B3 family protein
Ro02_G16405B3 family protein
Ro02_G25460B3 family protein
Ro02_G25590B3 family protein
Ro02_G25595B3 family protein
Ro02_G26236B3 family protein
Ro02_G35899B3 family protein
Ro02_G35901B3 family protein
Ro02_G35903B3 family protein
Ro03_G02072B3 family protein
Ro03_G02148B3 family protein
Ro03_G05930B3 family protein
Ro03_G06537B3 family protein
Ro03_G10607B3 family protein
Ro03_G17485B3 family protein
Ro03_G22592B3 family protein
Ro03_G31850B3 family protein
Ro03_G32653B3 family protein
Ro04_G08839B3 family protein
Ro04_G12917B3 family protein
Ro04_G19702B3 family protein
Ro04_G19844B3 family protein
Ro04_G21702B3 family protein
Ro05_G01777B3 family protein
Ro05_G03305B3 family protein
Ro05_G14474B3 family protein
Ro05_G22140B3 family protein
Ro05_G24442B3 family protein
Ro05_G26396B3 family protein
Ro05_G31457B3 family protein
Ro06_G03748B3 family protein
Ro06_G13350B3 family protein
Ro06_G15451B3 family protein
Ro06_G17377B3 family protein
Ro06_G20451B3 family protein
Ro06_G22312B3 family protein
Ro06_G28290B3 family protein
Ro06_G28456B3 family protein
Ro06_G28516B3 family protein
Ro06_G28517B3 family protein
Ro07_G06905B3 family protein
Ro07_G08990B3 family protein
Ro07_G11490B3 family protein
Ro07_G13018B3 family protein
Ro07_G15048B3 family protein
Ro07_G20423B3 family protein
Ro07_G20822B3 family protein
Ro07_G21102B3 family protein
Ro07_G21109B3 family protein
B3 Family Introduction

The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.

All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1). The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.

Swaminathan K, Peterson K, Jack T.
The plant B3 superfamily.
Trends Plant Sci, 2008. 13(12): p. 647-55.
PMID: 18986826

Note: In plantTFDB, B3 family includes LAV family, REM family, and RAV family (those do not contain AP2 domain).