PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
---|---|---|
Pyrus communis (34) | PCP000836.1 | GATA family protein |
PCP002083.1 | GATA family protein | |
PCP003781.1 | GATA family protein | |
PCP004028.1 | GATA family protein | |
PCP005050.1 | GATA family protein | |
PCP005357.1 | GATA family protein | |
PCP006865.1 | GATA family protein | |
PCP009599.1 | GATA family protein | |
PCP010082.1 | GATA family protein | |
PCP010231.1 | GATA family protein | |
PCP010817.1 | GATA family protein | |
PCP012100.1 | GATA family protein | |
PCP012178.1 | GATA family protein | |
PCP013140.1 | GATA family protein | |
PCP013291.1 | GATA family protein | |
PCP014555.1 | GATA family protein | |
PCP014842.1 | GATA family protein | |
PCP015167.1 | GATA family protein | |
PCP016288.1 | GATA family protein | |
PCP016938.1 | GATA family protein | |
PCP018270.1 | GATA family protein | |
PCP019943.1 | GATA family protein | |
PCP024933.1 | GATA family protein | |
PCP027013.1 | GATA family protein | |
PCP027594.1 | GATA family protein | |
PCP028032.1 | GATA family protein | |
PCP028266.1 | GATA family protein | |
PCP029483.1 | GATA family protein | |
PCP037267.1 | GATA family protein | |
PCP038682.1 | GATA family protein | |
PCP042779.1 | GATA family protein | |
PCP043011.1 | GATA family protein | |
PCP043441.1 | GATA family protein | |
PCP044410.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008