PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Ipomoea nil
GATA Family
Species TF ID Description
XP_019150894.1GATA family protein
XP_019154709.1GATA family protein
XP_019156191.1GATA family protein
XP_019163663.1GATA family protein
XP_019165447.1GATA family protein
XP_019166505.1GATA family protein
XP_019169208.1GATA family protein
XP_019173038.1GATA family protein
XP_019173179.1GATA family protein
XP_019173186.1GATA family protein
XP_019173188.1GATA family protein
XP_019174105.1GATA family protein
XP_019174106.1GATA family protein
XP_019174107.1GATA family protein
XP_019174108.1GATA family protein
XP_019174847.1GATA family protein
XP_019177135.1GATA family protein
XP_019177136.1GATA family protein
XP_019177663.1GATA family protein
XP_019178239.1GATA family protein
XP_019180842.1GATA family protein
XP_019181508.1GATA family protein
XP_019181509.1GATA family protein
XP_019182594.1GATA family protein
XP_019182720.1GATA family protein
XP_019182721.1GATA family protein
XP_019184148.1GATA family protein
XP_019184900.1GATA family protein
XP_019188940.1GATA family protein
XP_019190950.1GATA family protein
XP_019190951.1GATA family protein
XP_019190952.1GATA family protein
XP_019191574.1GATA family protein
XP_019193034.1GATA family protein
XP_019194126.1GATA family protein
XP_019196274.1GATA family protein
XP_019196559.1GATA family protein
XP_019197057.1GATA family protein
XP_019197210.1GATA family protein
XP_019197211.1GATA family protein
XP_019197212.1GATA family protein
XP_019198448.1GATA family protein
XP_019198449.1GATA family protein
XP_019198873.1GATA family protein
XP_019198875.1GATA family protein
XP_019199324.1GATA family protein
XP_019199325.1GATA family protein
XP_019199326.1GATA family protein
XP_019199327.1GATA family protein
GATA Family Introduction

GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.

GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.

Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.

Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008