PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
---|---|---|
XP_021635203.1 | GATA family protein | |
XP_021635394.1 | GATA family protein | |
XP_021637149.1 | GATA family protein | |
XP_021638996.1 | GATA family protein | |
XP_021639112.1 | GATA family protein | |
XP_021639434.1 | GATA family protein | |
XP_021639435.1 | GATA family protein | |
XP_021642387.1 | GATA family protein | |
XP_021642388.1 | GATA family protein | |
XP_021642389.1 | GATA family protein | |
XP_021642390.1 | GATA family protein | |
XP_021642391.1 | GATA family protein | |
XP_021642399.1 | GATA family protein | |
XP_021642400.1 | GATA family protein | |
XP_021643253.1 | GATA family protein | |
XP_021644846.1 | GATA family protein | |
XP_021645882.1 | GATA family protein | |
XP_021645883.1 | GATA family protein | |
XP_021646316.1 | GATA family protein | |
XP_021648912.1 | GATA family protein | |
XP_021648913.1 | GATA family protein | |
XP_021649812.1 | GATA family protein | |
XP_021649813.1 | GATA family protein | |
XP_021649814.1 | GATA family protein | |
XP_021649815.1 | GATA family protein | |
XP_021649816.1 | GATA family protein | |
XP_021649817.1 | GATA family protein | |
XP_021649833.1 | GATA family protein | |
XP_021650424.1 | GATA family protein | |
XP_021650537.1 | GATA family protein | |
XP_021650538.1 | GATA family protein | |
XP_021650539.1 | GATA family protein | |
XP_021652424.1 | GATA family protein | |
XP_021652666.1 | GATA family protein | |
XP_021652668.1 | GATA family protein | |
XP_021653680.1 | GATA family protein | |
XP_021653681.1 | GATA family protein | |
XP_021654130.1 | GATA family protein | |
XP_021655636.1 | GATA family protein | |
XP_021655637.1 | GATA family protein | |
XP_021656347.1 | GATA family protein | |
XP_021658259.1 | GATA family protein | |
XP_021658260.1 | GATA family protein | |
XP_021658785.1 | GATA family protein | |
XP_021659760.1 | GATA family protein | |
XP_021663470.1 | GATA family protein | |
XP_021663753.1 | GATA family protein | |
XP_021668803.1 | GATA family protein | |
XP_021668804.1 | GATA family protein | |
XP_021672654.1 | GATA family protein | |
XP_021672758.1 | GATA family protein | |
XP_021672985.1 | GATA family protein | |
XP_021673019.1 | GATA family protein | |
XP_021674171.1 | GATA family protein | |
XP_021676729.1 | GATA family protein | |
XP_021677936.1 | GATA family protein | |
XP_021678705.1 | GATA family protein | |
XP_021678706.1 | GATA family protein | |
XP_021680781.1 | GATA family protein | |
XP_021685477.1 | GATA family protein | |
XP_021685479.1 | GATA family protein | |
XP_021687410.1 | GATA family protein | |
XP_021689154.1 | GATA family protein | |
XP_021690020.1 | GATA family protein | |
XP_021690961.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008