PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Dioscorea rotundata
GATA Family
Species TF ID Description
Dr01113.1GATA family protein
Dr01458.1GATA family protein
Dr01578.1GATA family protein
Dr03006.1GATA family protein
Dr03049.1GATA family protein
Dr03230.1GATA family protein
Dr04024.1GATA family protein
Dr04197.1GATA family protein
Dr05655.1GATA family protein
Dr06418.1GATA family protein
Dr08801.1GATA family protein
Dr09377.1GATA family protein
Dr10135.1GATA family protein
Dr11837.1GATA family protein
Dr11839.1GATA family protein
Dr13211.1GATA family protein
Dr14909.1GATA family protein
Dr17283.1GATA family protein
Dr17622.1GATA family protein
Dr19215.1GATA family protein
GATA Family Introduction

GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.

GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.

Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.

Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008