PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Corchorus capsularis
GATA Family
Species TF ID Description
OMO50806GATA family protein
OMO50807GATA family protein
OMO53576GATA family protein
OMO56910GATA family protein
OMO57005GATA family protein
OMO57237GATA family protein
OMO62333GATA family protein
OMO63931GATA family protein
OMO66918GATA family protein
OMO67310GATA family protein
OMO67422GATA family protein
OMO69528GATA family protein
OMO74381GATA family protein
OMO76114GATA family protein
OMO85251GATA family protein
OMO85252GATA family protein
OMO91858GATA family protein
OMO95769GATA family protein
OMO96220GATA family protein
OMO96713GATA family protein
OMO99318GATA family protein
OMP11703GATA family protein
GATA Family Introduction

GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.

GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.

Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.

Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008