PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Corchorus capsularis
ERF Family
Species TF ID Description
OMO50071ERF family protein
OMO52888ERF family protein
OMO53603ERF family protein
OMO53704ERF family protein
OMO54038ERF family protein
OMO54485ERF family protein
OMO54838ERF family protein
OMO54839ERF family protein
OMO54840ERF family protein
OMO55902ERF family protein
OMO56027ERF family protein
OMO56624ERF family protein
OMO57662ERF family protein
OMO58700ERF family protein
OMO59579ERF family protein
OMO59626ERF family protein
OMO59774ERF family protein
OMO60261ERF family protein
OMO60970ERF family protein
OMO61450ERF family protein
OMO61621ERF family protein
OMO61649ERF family protein
OMO62636ERF family protein
OMO63164ERF family protein
OMO63890ERF family protein
OMO63892ERF family protein
OMO64345ERF family protein
OMO64574ERF family protein
OMO64601ERF family protein
OMO65563ERF family protein
OMO65564ERF family protein
OMO65577ERF family protein
OMO65776ERF family protein
OMO67151ERF family protein
OMO67152ERF family protein
OMO68242ERF family protein
OMO68966ERF family protein
OMO69575ERF family protein
OMO69600ERF family protein
OMO69601ERF family protein
OMO69602ERF family protein
OMO70530ERF family protein
OMO71049ERF family protein
OMO72022ERF family protein
OMO72023ERF family protein
OMO74078ERF family protein
OMO76345ERF family protein
OMO78882ERF family protein
OMO79368ERF family protein
OMO79720ERF family protein
OMO81055ERF family protein
OMO81118ERF family protein
OMO81384ERF family protein
OMO82091ERF family protein
OMO83572ERF family protein
OMO84592ERF family protein
OMO85556ERF family protein
OMO85600ERF family protein
OMO85983ERF family protein
OMO86701ERF family protein
OMO86911ERF family protein
OMO87505ERF family protein
OMO88571ERF family protein
OMO88588ERF family protein
OMO88939ERF family protein
OMO89593ERF family protein
OMO89768ERF family protein
OMO90265ERF family protein
OMO92596ERF family protein
OMO93313ERF family protein
OMO94762ERF family protein
OMO94873ERF family protein
OMO95171ERF family protein
OMO95690ERF family protein
OMO96743ERF family protein
OMO97299ERF family protein
OMP02011ERF family protein
OMP02105ERF family protein
OMP03102ERF family protein
OMP03103ERF family protein
OMP11374ERF family protein
OMP12218ERF family protein
ERF Family Introduction

The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding. These three families have been defined as follows. The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, in addition to the single AP2/ERF domain.

It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.

After finding the tobacco ERFs, many proteins in the ERF family were identified and implicated in many diverse functions in cellular processes, such as hormonal signal transduction, response to biotic and abiotic stresses, regulation of metabolism, and in developmental processes in various plant species.

Toshitsugu Nakano, Kaoru Suzuki, Tatsuhito Fujimura, and Hideaki Shinshi.
Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
Plant Physiol, 2006. 140(2): p. 411-32.
PMID: 16407444


The first class are proteins which bind to ethylene response elements (ERE) or GCC boxes (tobacco EREBPs, Arabidopsis AtEBP and AtERF1-5, and tomato Pti4-6) found in the promoters of ethylene-inducible pathogenesis related genes. The GCC box is an 11 bp sequence (TAAGAGCCGCC) with a core GCCGCC sequence that is required for binding.
The second class includes proteins that bind to the C-repeat or dehydration response element (DRE) in the promoters of genes that are turned on in response to low temperatures and/or water deficit (CBF1, CBF2, CBF3/DREB1A and DREB2A). The C-repeat/DREs contain the core sequence CCGAC.

Nole-Wilson S, Krizek BA.
DNA binding properties of the Arabidopsis floral development protein AINTEGUMENTA.
Nucleic Acids Res. 2000 Nov 1;28(21):4076-82. Erratum in: Nucleic Acids Res 2001 Mar 1;29(5):1261.
PMID: 11058102