PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Coffea arabica
NF-YA Family
Species TF ID Description
XP_027065267.1NF-YA family protein
XP_027065442.1NF-YA family protein
XP_027065443.1NF-YA family protein
XP_027065444.1NF-YA family protein
XP_027065445.1NF-YA family protein
XP_027065718.1NF-YA family protein
XP_027066115.1NF-YA family protein
XP_027066116.1NF-YA family protein
XP_027066117.1NF-YA family protein
XP_027066118.1NF-YA family protein
XP_027066119.1NF-YA family protein
XP_027066127.1NF-YA family protein
XP_027069935.1NF-YA family protein
XP_027069936.1NF-YA family protein
XP_027069937.1NF-YA family protein
XP_027069938.1NF-YA family protein
XP_027069940.1NF-YA family protein
XP_027069941.1NF-YA family protein
XP_027069942.1NF-YA family protein
XP_027070302.1NF-YA family protein
XP_027070307.1NF-YA family protein
XP_027079757.1NF-YA family protein
XP_027079758.1NF-YA family protein
XP_027083061.1NF-YA family protein
XP_027083062.1NF-YA family protein
XP_027083063.1NF-YA family protein
XP_027083064.1NF-YA family protein
XP_027083683.1NF-YA family protein
XP_027087816.1NF-YA family protein
XP_027106866.1NF-YA family protein
XP_027106867.1NF-YA family protein
XP_027106868.1NF-YA family protein
XP_027113731.1NF-YA family protein
XP_027113732.1NF-YA family protein
XP_027113738.1NF-YA family protein
XP_027113739.1NF-YA family protein
XP_027124843.1NF-YA family protein
XP_027125128.1NF-YA family protein
XP_027126091.1NF-YA family protein
NF-YA Family Introduction

NF-Y transcription factors are likely found in all eukaryotes and have roles in the regulation of diverse genes (McNabb et al., 1995; Edwards et al., 1998; Maity and de Crombrugghe, 1998; Mantovani, 1999). In mammals, where their biochemistry is well described, the NF-Y transcription factor complex is composed of three unique subunits: NF-YA, NF-YB, and NF-YC. Assembly of the NF-Y heterotrimer in mammals follows a strict, stepwise pattern (Sinha et al., 1995, 1996). Initially, a heterodimer is formed in the cytoplasm between the subunits NF-YB and NF-YC. This dimer then translocates to the nucleus, where the third subunit, NF-YA, is recruited to generate the mature, heterotrimeric NF-Y transcription factor (Frontini et al., 2004; Kahle et al., 2005). Mature NF-Y binds promoters with the core pentamer nucleotide sequence CCAAT, and this can result in either positive or negative transcriptional regulation(Peng and Jahroudi, 2002, 2003; Ceribelli et al., 2008).

NF-YA proteins are characterized by the presence of Gln(Q)- and Ser/Thr(S/T)-rich NH2 termini, a subunit interaction domain (NF-YB/NF-YC interaction), and a DNA-binding domain (Olesen and Guarente, 1990; Maity and de Crombrugghe, 1992; Xing et al., 1993, 1994). The protein interaction and DNA binding domains are well conserved between plant and other eukaryote lineages.

Siefers N, Dang KK, Kumimoto RW, Bynum WE 4th, Tayrose G, Holt BF 3rd.
Tissue-specific expression patterns of Arabidopsis NF-Y transcription factors suggest potential for extensive combinatorial complexity.
Plant Physiol, 2009. 149(2): p. 625-41.
PMID: 19019982