PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Coffea arabica
LBD Family
Species TF ID Description
XP_027060975.1LBD family protein
XP_027062426.1LBD family protein
XP_027063091.1LBD family protein
XP_027063203.1LBD family protein
XP_027063413.1LBD family protein
XP_027063563.1LBD family protein
XP_027063574.1LBD family protein
XP_027067307.1LBD family protein
XP_027073729.1LBD family protein
XP_027073953.1LBD family protein
XP_027075302.1LBD family protein
XP_027076672.1LBD family protein
XP_027076751.1LBD family protein
XP_027076752.1LBD family protein
XP_027076753.1LBD family protein
XP_027077308.1LBD family protein
XP_027077434.1LBD family protein
XP_027077531.1LBD family protein
XP_027079080.1LBD family protein
XP_027082621.1LBD family protein
XP_027083853.1LBD family protein
XP_027086298.1LBD family protein
XP_027086661.1LBD family protein
XP_027086810.1LBD family protein
XP_027087601.1LBD family protein
XP_027087606.1LBD family protein
XP_027087620.1LBD family protein
XP_027088304.1LBD family protein
XP_027088820.1LBD family protein
XP_027089594.1LBD family protein
XP_027091064.1LBD family protein
XP_027091071.1LBD family protein
XP_027091118.1LBD family protein
XP_027096315.1LBD family protein
XP_027097963.1LBD family protein
XP_027099297.1LBD family protein
XP_027100762.1LBD family protein
XP_027101332.1LBD family protein
XP_027101333.1LBD family protein
XP_027101338.1LBD family protein
XP_027101347.1LBD family protein
XP_027101865.1LBD family protein
XP_027102478.1LBD family protein
XP_027102496.1LBD family protein
XP_027102681.1LBD family protein
XP_027104205.1LBD family protein
XP_027104297.1LBD family protein
XP_027106083.1LBD family protein
XP_027107812.1LBD family protein
XP_027107813.1LBD family protein
XP_027108150.1LBD family protein
XP_027108151.1LBD family protein
XP_027108153.1LBD family protein
XP_027108409.1LBD family protein
XP_027108767.1LBD family protein
XP_027109200.1LBD family protein
XP_027109622.1LBD family protein
XP_027109743.1LBD family protein
XP_027110336.1LBD family protein
XP_027110460.1LBD family protein
XP_027110660.1LBD family protein
XP_027110735.1LBD family protein
XP_027110763.1LBD family protein
XP_027112622.1LBD family protein
XP_027115632.1LBD family protein
XP_027115633.1LBD family protein
XP_027121627.1LBD family protein
XP_027122366.1LBD family protein
XP_027123818.1LBD family protein
XP_027124413.1LBD family protein
XP_027124508.1LBD family protein
XP_027124669.1LBD family protein
XP_027125803.1LBD family protein
XP_027126056.1LBD family protein
XP_027127049.1LBD family protein
LBD Family Introduction

The in vitro DNA-binding and heterologous transcriptional activation studies presented here indicate that the LBD protein family represents a new class of DNA-binding transcription factors that recognize the cis-element GCGGCG. The DNA-binding activity is present within the LOB domain, which is conserved throughout the 43 Arabidopsis family members as well as LBD proteins in other plant species.

the LBD genes encode a novel class of DNA-binding transcription factors. Post-translational regulation of transcription factors is often crucial for control of gene expression. In our study, we demonstrate that members of the basic helix-loop-helix (bHLH) family of transcription factors are capable of interacting with LOB. The expression patterns of bHLH048 and LOB overlap at lateral organ boundaries. Interestingly, the interaction of bHLH048 with LOB results in reduced affinity of LOB for the consensus DNA motif. Thus, our studies suggest that bHLH048 post-translationally regulates the function of LOB at lateral organ boundaries.

Aman Husbands, Elizabeth M. Bell, Bin Shuai, Harley M.S. Smith, and Patricia S. Springer.
LATERAL ORGAN BOUNDARIES defines a new family of DNA-binding transcription factors and can interact with specific bHLH proteins.
Nucleic Acids Res, 2007. 35(19): p. 6663-71.
PMID: 17913740