PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Coffea arabica (297) | XP_027060687.1 | FAR1 family protein |
XP_027060722.1 | FAR1 family protein | |
XP_027060845.1 | FAR1 family protein | |
XP_027060859.1 | FAR1 family protein | |
XP_027060871.1 | FAR1 family protein | |
XP_027060895.1 | FAR1 family protein | |
XP_027060933.1 | FAR1 family protein | |
XP_027061275.1 | FAR1 family protein | |
XP_027061276.1 | FAR1 family protein | |
XP_027061277.1 | FAR1 family protein | |
XP_027061278.1 | FAR1 family protein | |
XP_027061279.1 | FAR1 family protein | |
XP_027061863.1 | FAR1 family protein | |
XP_027061864.1 | FAR1 family protein | |
XP_027061865.1 | FAR1 family protein | |
XP_027061867.1 | FAR1 family protein | |
XP_027061868.1 | FAR1 family protein | |
XP_027061869.1 | FAR1 family protein | |
XP_027062984.1 | FAR1 family protein | |
XP_027063196.1 | FAR1 family protein | |
XP_027064573.1 | FAR1 family protein | |
XP_027064608.1 | FAR1 family protein | |
XP_027064893.1 | FAR1 family protein | |
XP_027064894.1 | FAR1 family protein | |
XP_027064895.1 | FAR1 family protein | |
XP_027064896.1 | FAR1 family protein | |
XP_027067279.1 | FAR1 family protein | |
XP_027067360.1 | FAR1 family protein | |
XP_027067458.1 | FAR1 family protein | |
XP_027067532.1 | FAR1 family protein | |
XP_027067533.1 | FAR1 family protein | |
XP_027067546.1 | FAR1 family protein | |
XP_027067668.1 | FAR1 family protein | |
XP_027067800.1 | FAR1 family protein | |
XP_027067811.1 | FAR1 family protein | |
XP_027067814.1 | FAR1 family protein | |
XP_027067957.1 | FAR1 family protein | |
XP_027067958.1 | FAR1 family protein | |
XP_027067959.1 | FAR1 family protein | |
XP_027067960.1 | FAR1 family protein | |
XP_027067961.1 | FAR1 family protein | |
XP_027067962.1 | FAR1 family protein | |
XP_027067963.1 | FAR1 family protein | |
XP_027067964.1 | FAR1 family protein | |
XP_027068259.1 | FAR1 family protein | |
XP_027068396.1 | FAR1 family protein | |
XP_027068513.1 | FAR1 family protein | |
XP_027068560.1 | FAR1 family protein | |
XP_027069583.1 | FAR1 family protein | |
XP_027069926.1 | FAR1 family protein | |
XP_027071125.1 | FAR1 family protein | |
XP_027071220.1 | FAR1 family protein | |
XP_027071500.1 | FAR1 family protein | |
XP_027071501.1 | FAR1 family protein | |
XP_027071502.1 | FAR1 family protein | |
XP_027071503.1 | FAR1 family protein | |
XP_027071504.1 | FAR1 family protein | |
XP_027071505.1 | FAR1 family protein | |
XP_027071564.1 | FAR1 family protein | |
XP_027071648.1 | FAR1 family protein | |
XP_027071742.1 | FAR1 family protein | |
XP_027071894.1 | FAR1 family protein | |
XP_027071912.1 | FAR1 family protein | |
XP_027071967.1 | FAR1 family protein | |
XP_027072117.1 | FAR1 family protein | |
XP_027072120.1 | FAR1 family protein | |
XP_027073415.1 | FAR1 family protein | |
XP_027073416.1 | FAR1 family protein | |
XP_027075833.1 | FAR1 family protein | |
XP_027075902.1 | FAR1 family protein | |
XP_027075911.1 | FAR1 family protein | |
XP_027075921.1 | FAR1 family protein | |
XP_027076947.1 | FAR1 family protein | |
XP_027077138.1 | FAR1 family protein | |
XP_027077880.1 | FAR1 family protein | |
XP_027077881.1 | FAR1 family protein | |
XP_027079890.1 | FAR1 family protein | |
XP_027079891.1 | FAR1 family protein | |
XP_027079892.1 | FAR1 family protein | |
XP_027079893.1 | FAR1 family protein | |
XP_027079924.1 | FAR1 family protein | |
XP_027080827.1 | FAR1 family protein | |
XP_027081119.1 | FAR1 family protein | |
XP_027081555.1 | FAR1 family protein | |
XP_027081557.1 | FAR1 family protein | |
XP_027081558.1 | FAR1 family protein | |
XP_027081559.1 | FAR1 family protein | |
XP_027081560.1 | FAR1 family protein | |
XP_027081562.1 | FAR1 family protein | |
XP_027081571.1 | FAR1 family protein | |
XP_027081720.1 | FAR1 family protein | |
XP_027081721.1 | FAR1 family protein | |
XP_027081722.1 | FAR1 family protein | |
XP_027081723.1 | FAR1 family protein | |
XP_027081724.1 | FAR1 family protein | |
XP_027082156.1 | FAR1 family protein | |
XP_027082253.1 | FAR1 family protein | |
XP_027082420.1 | FAR1 family protein | |
XP_027082578.1 | FAR1 family protein | |
XP_027082638.1 | FAR1 family protein | |
XP_027082969.1 | FAR1 family protein | |
XP_027082970.1 | FAR1 family protein | |
XP_027082971.1 | FAR1 family protein | |
XP_027083103.1 | FAR1 family protein | |
XP_027083622.1 | FAR1 family protein | |
XP_027083848.1 | FAR1 family protein | |
XP_027084965.1 | FAR1 family protein | |
XP_027084966.1 | FAR1 family protein | |
XP_027084967.1 | FAR1 family protein | |
XP_027084968.1 | FAR1 family protein | |
XP_027085277.1 | FAR1 family protein | |
XP_027085278.1 | FAR1 family protein | |
XP_027085279.1 | FAR1 family protein | |
XP_027085280.1 | FAR1 family protein | |
XP_027086486.1 | FAR1 family protein | |
XP_027086562.1 | FAR1 family protein | |
XP_027086602.1 | FAR1 family protein | |
XP_027086718.1 | FAR1 family protein | |
XP_027086719.1 | FAR1 family protein | |
XP_027086738.1 | FAR1 family protein | |
XP_027087549.1 | FAR1 family protein | |
XP_027087583.1 | FAR1 family protein | |
XP_027087585.1 | FAR1 family protein | |
XP_027088552.1 | FAR1 family protein | |
XP_027088559.1 | FAR1 family protein | |
XP_027088563.1 | FAR1 family protein | |
XP_027088622.1 | FAR1 family protein | |
XP_027088629.1 | FAR1 family protein | |
XP_027088713.1 | FAR1 family protein | |
XP_027088855.1 | FAR1 family protein | |
XP_027088856.1 | FAR1 family protein | |
XP_027088857.1 | FAR1 family protein | |
XP_027088858.1 | FAR1 family protein | |
XP_027088859.1 | FAR1 family protein | |
XP_027088860.1 | FAR1 family protein | |
XP_027088861.1 | FAR1 family protein | |
XP_027088862.1 | FAR1 family protein | |
XP_027088864.1 | FAR1 family protein | |
XP_027088865.1 | FAR1 family protein | |
XP_027088866.1 | FAR1 family protein | |
XP_027088867.1 | FAR1 family protein | |
XP_027089604.1 | FAR1 family protein | |
XP_027090186.1 | FAR1 family protein | |
XP_027090240.1 | FAR1 family protein | |
XP_027090287.1 | FAR1 family protein | |
XP_027090313.1 | FAR1 family protein | |
XP_027090341.1 | FAR1 family protein | |
XP_027090468.1 | FAR1 family protein | |
XP_027090471.1 | FAR1 family protein | |
XP_027090521.1 | FAR1 family protein | |
XP_027092340.1 | FAR1 family protein | |
XP_027092348.1 | FAR1 family protein | |
XP_027092356.1 | FAR1 family protein | |
XP_027092363.1 | FAR1 family protein | |
XP_027092370.1 | FAR1 family protein | |
XP_027092380.1 | FAR1 family protein | |
XP_027092392.1 | FAR1 family protein | |
XP_027092402.1 | FAR1 family protein | |
XP_027093545.1 | FAR1 family protein | |
XP_027093639.1 | FAR1 family protein | |
XP_027093747.1 | FAR1 family protein | |
XP_027095991.1 | FAR1 family protein | |
XP_027096054.1 | FAR1 family protein | |
XP_027096354.1 | FAR1 family protein | |
XP_027098849.1 | FAR1 family protein | |
XP_027098855.1 | FAR1 family protein | |
XP_027098867.1 | FAR1 family protein | |
XP_027098938.1 | FAR1 family protein | |
XP_027098991.1 | FAR1 family protein | |
XP_027099037.1 | FAR1 family protein | |
XP_027099087.1 | FAR1 family protein | |
XP_027100450.1 | FAR1 family protein | |
XP_027100974.1 | FAR1 family protein | |
XP_027100977.1 | FAR1 family protein | |
XP_027101002.1 | FAR1 family protein | |
XP_027101195.1 | FAR1 family protein | |
XP_027101576.1 | FAR1 family protein | |
XP_027101787.1 | FAR1 family protein | |
XP_027102791.1 | FAR1 family protein | |
XP_027102938.1 | FAR1 family protein | |
XP_027102958.1 | FAR1 family protein | |
XP_027103035.1 | FAR1 family protein | |
XP_027103038.1 | FAR1 family protein | |
XP_027103039.1 | FAR1 family protein | |
XP_027103082.1 | FAR1 family protein | |
XP_027103216.1 | FAR1 family protein | |
XP_027103238.1 | FAR1 family protein | |
XP_027107497.1 | FAR1 family protein | |
XP_027107498.1 | FAR1 family protein | |
XP_027109018.1 | FAR1 family protein | |
XP_027109039.1 | FAR1 family protein | |
XP_027109113.1 | FAR1 family protein | |
XP_027109187.1 | FAR1 family protein | |
XP_027109313.1 | FAR1 family protein | |
XP_027109337.1 | FAR1 family protein | |
XP_027109367.1 | FAR1 family protein | |
XP_027109384.1 | FAR1 family protein | |
XP_027109388.1 | FAR1 family protein | |
XP_027109436.1 | FAR1 family protein | |
XP_027109451.1 | FAR1 family protein | |
XP_027109476.1 | FAR1 family protein | |
XP_027109565.1 | FAR1 family protein | |
XP_027113230.1 | FAR1 family protein | |
XP_027113238.1 | FAR1 family protein | |
XP_027113247.1 | FAR1 family protein | |
XP_027113254.1 | FAR1 family protein | |
XP_027113262.1 | FAR1 family protein | |
XP_027113270.1 | FAR1 family protein | |
XP_027113278.1 | FAR1 family protein | |
XP_027113287.1 | FAR1 family protein | |
XP_027113288.1 | FAR1 family protein | |
XP_027113292.1 | FAR1 family protein | |
XP_027113305.1 | FAR1 family protein | |
XP_027114426.1 | FAR1 family protein | |
XP_027114428.1 | FAR1 family protein | |
XP_027116163.1 | FAR1 family protein | |
XP_027116164.1 | FAR1 family protein | |
XP_027116166.1 | FAR1 family protein | |
XP_027116167.1 | FAR1 family protein | |
XP_027117481.1 | FAR1 family protein | |
XP_027117482.1 | FAR1 family protein | |
XP_027117483.1 | FAR1 family protein | |
XP_027117484.1 | FAR1 family protein | |
XP_027117799.1 | FAR1 family protein | |
XP_027118400.1 | FAR1 family protein | |
XP_027118464.1 | FAR1 family protein | |
XP_027118606.1 | FAR1 family protein | |
XP_027119560.1 | FAR1 family protein | |
XP_027119561.1 | FAR1 family protein | |
XP_027119562.1 | FAR1 family protein | |
XP_027119563.1 | FAR1 family protein | |
XP_027119564.1 | FAR1 family protein | |
XP_027119573.1 | FAR1 family protein | |
XP_027119910.1 | FAR1 family protein | |
XP_027120002.1 | FAR1 family protein | |
XP_027120394.1 | FAR1 family protein | |
XP_027120396.1 | FAR1 family protein | |
XP_027120398.1 | FAR1 family protein | |
XP_027120408.1 | FAR1 family protein | |
XP_027120486.1 | FAR1 family protein | |
XP_027120787.1 | FAR1 family protein | |
XP_027121208.1 | FAR1 family protein | |
XP_027121209.1 | FAR1 family protein | |
XP_027121210.1 | FAR1 family protein | |
XP_027121211.1 | FAR1 family protein | |
XP_027121642.1 | FAR1 family protein | |
XP_027121711.1 | FAR1 family protein | |
XP_027121779.1 | FAR1 family protein | |
XP_027121781.1 | FAR1 family protein | |
XP_027121782.1 | FAR1 family protein | |
XP_027121887.1 | FAR1 family protein | |
XP_027121897.1 | FAR1 family protein | |
XP_027121956.1 | FAR1 family protein | |
XP_027122100.1 | FAR1 family protein | |
XP_027122182.1 | FAR1 family protein | |
XP_027122186.1 | FAR1 family protein | |
XP_027122203.1 | FAR1 family protein | |
XP_027122234.1 | FAR1 family protein | |
XP_027122269.1 | FAR1 family protein | |
XP_027122276.1 | FAR1 family protein | |
XP_027122283.1 | FAR1 family protein | |
XP_027122285.1 | FAR1 family protein | |
XP_027122291.1 | FAR1 family protein | |
XP_027122340.1 | FAR1 family protein | |
XP_027122369.1 | FAR1 family protein | |
XP_027122408.1 | FAR1 family protein | |
XP_027122419.1 | FAR1 family protein | |
XP_027122965.1 | FAR1 family protein | |
XP_027123162.1 | FAR1 family protein | |
XP_027123335.1 | FAR1 family protein | |
XP_027123400.1 | FAR1 family protein | |
XP_027123964.1 | FAR1 family protein | |
XP_027124035.1 | FAR1 family protein | |
XP_027124120.1 | FAR1 family protein | |
XP_027124148.1 | FAR1 family protein | |
XP_027124183.1 | FAR1 family protein | |
XP_027124197.1 | FAR1 family protein | |
XP_027124265.1 | FAR1 family protein | |
XP_027124308.1 | FAR1 family protein | |
XP_027124340.1 | FAR1 family protein | |
XP_027124383.1 | FAR1 family protein | |
XP_027124952.1 | FAR1 family protein | |
XP_027124953.1 | FAR1 family protein | |
XP_027124954.1 | FAR1 family protein | |
XP_027125466.1 | FAR1 family protein | |
XP_027125467.1 | FAR1 family protein | |
XP_027125468.1 | FAR1 family protein | |
XP_027125469.1 | FAR1 family protein | |
XP_027125470.1 | FAR1 family protein | |
XP_027125471.1 | FAR1 family protein | |
XP_027126069.1 | FAR1 family protein | |
XP_027126134.1 | FAR1 family protein | |
XP_027126392.1 | FAR1 family protein | |
XP_027126393.1 | FAR1 family protein | |
XP_027127729.1 | FAR1 family protein | |
XP_027127779.1 | FAR1 family protein | |
XP_027127782.1 | FAR1 family protein |
We show that Arabidopsis FHY3 and FAR1, which encode two proteins related to Mutator-like transposases, act together to modulate phyA signaling by directly activating the transcription of FHY1 and FHL, whose products are essential for light-induced phyA nuclear accumulation and subsequent light responses. FHY3 and FAR1 have separable DNA binding and transcriptional activation domains that are highly conserved in Mutator-like transposases. Further, expression of FHY3 and FAR1 is negatively regulated by phyA signaling. We propose that FHY3 and FAR1 represent transcription factors that have been co-opted from an ancient Mutator-like transposase(s) to modulate phyA-signaling homeostasis in higher plants.
We next used a yeast one-hybrid assay to delineate the DNA sequences to which FHY3 and FAR1 bind. GAD-FHY3 or GAD-FAR1 fusion proteins (GAD, GAL4 transcriptional activation domain), but not GAD alone, activated the LacZ reporter genes driven by the FHY1 and FHL promoters. Deletion analysis narrowed down the FHY3/FAR1 binding site to a 39-bp promoter subfragment located on the "a" fragment for both FHY1 and FHL. Notably, these subfragments share a stretch of consensus sequence, 5'-TTCACGCGCC-3'. Mutating the core sequence "CACGCGC" of this motif (m2 and m3 for FHY1, m5 for FHL) abolished the reporter gene activation by both GAD-FHY3 and GAD-FAR1. Mutating the flanking sequences (m1 and m4) did not obviously affect the reporter gene activation by GAD-FAR1, but clearly reduced activation by GAD-FHY3. Thus, "CACGCGC" likely defines a cis-element that confers specific binding for FHY3 and FAR1 and is named FBS for FHY3-FAR1 binding site.
Lin R, Ding L, Casola C, Ripoll DR, Feschotte C, Wang H.
Transposase-derived transcription factors regulate light signaling in Arabidopsis.
Science, 2007. 318(5854): p. 1302-5.
PMID: 18033885