PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Zostera marina (97) | Zosma101g00340.1 | MYB family protein |
Zosma107g00550.1 | MYB family protein | |
Zosma107g00630.1 | MYB family protein | |
Zosma111g00090.1 | MYB family protein | |
Zosma112g00580.1 | MYB family protein | |
Zosma113g00270.1 | MYB family protein | |
Zosma115g00150.1 | MYB family protein | |
Zosma120g00130.1 | MYB family protein | |
Zosma121g00750.1 | MYB family protein | |
Zosma122g00440.1 | MYB family protein | |
Zosma123g00220.1 | MYB family protein | |
Zosma125g00380.1 | MYB family protein | |
Zosma127g00350.1 | MYB family protein | |
Zosma12g00480.1 | MYB family protein | |
Zosma13g00160.1 | MYB family protein | |
Zosma141g00270.1 | MYB family protein | |
Zosma149g00180.1 | MYB family protein | |
Zosma149g00250.1 | MYB family protein | |
Zosma14g00330.1 | MYB family protein | |
Zosma154g00390.1 | MYB family protein | |
Zosma160g00050.1 | MYB family protein | |
Zosma160g00120.1 | MYB family protein | |
Zosma161g00580.1 | MYB family protein | |
Zosma170g00120.1 | MYB family protein | |
Zosma173g00220.1 | MYB family protein | |
Zosma17g00070.1 | MYB family protein | |
Zosma17g00430.1 | MYB family protein | |
Zosma181g00420.1 | MYB family protein | |
Zosma182g00050.1 | MYB family protein | |
Zosma182g00270.1 | MYB family protein | |
Zosma189g00230.1 | MYB family protein | |
Zosma193g00360.1 | MYB family protein | |
Zosma198g00250.1 | MYB family protein | |
Zosma19g00380.1 | MYB family protein | |
Zosma19g00820.1 | MYB family protein | |
Zosma1g01820.1 | MYB family protein | |
Zosma1g02960.1 | MYB family protein | |
Zosma200g00190.1 | MYB family protein | |
Zosma200g00210.1 | MYB family protein | |
Zosma207g00070.1 | MYB family protein | |
Zosma214g00340.1 | MYB family protein | |
Zosma218g00200.1 | MYB family protein | |
Zosma21g00380.1 | MYB family protein | |
Zosma239g00280.1 | MYB family protein | |
Zosma23g01470.1 | MYB family protein | |
Zosma256g00030.1 | MYB family protein | |
Zosma262g00100.1 | MYB family protein | |
Zosma267g00300.1 | MYB family protein | |
Zosma269g00220.1 | MYB family protein | |
Zosma281g00080.1 | MYB family protein | |
Zosma29g00950.1 | MYB family protein | |
Zosma2g01820.1 | MYB family protein | |
Zosma2g01900.1 | MYB family protein | |
Zosma314g00150.1 | MYB family protein | |
Zosma31g00870.1 | MYB family protein | |
Zosma31g01110.1 | MYB family protein | |
Zosma32g00420.1 | MYB family protein | |
Zosma34g00830.1 | MYB family protein | |
Zosma367g00100.1 | MYB family protein | |
Zosma36g00250.1 | MYB family protein | |
Zosma37g00410.1 | MYB family protein | |
Zosma37g00420.1 | MYB family protein | |
Zosma37g00610.1 | MYB family protein | |
Zosma38g00920.1 | MYB family protein | |
Zosma38g00960.1 | MYB family protein | |
Zosma391g00020.1 | MYB family protein | |
Zosma3g00470.1 | MYB family protein | |
Zosma3g00870.1 | MYB family protein | |
Zosma3g01690.1 | MYB family protein | |
Zosma415g00190.1 | MYB family protein | |
Zosma41g01120.1 | MYB family protein | |
Zosma42g00920.1 | MYB family protein | |
Zosma445g00050.1 | MYB family protein | |
Zosma44g00160.1 | MYB family protein | |
Zosma467g00200.1 | MYB family protein | |
Zosma48g00010.1 | MYB family protein | |
Zosma506g00020.1 | MYB family protein | |
Zosma50g00250.1 | MYB family protein | |
Zosma55g00400.1 | MYB family protein | |
Zosma59g00470.1 | MYB family protein | |
Zosma68g00080.1 | MYB family protein | |
Zosma68g00220.1 | MYB family protein | |
Zosma6g00090.1 | MYB family protein | |
Zosma70g00740.1 | MYB family protein | |
Zosma74g00200.1 | MYB family protein | |
Zosma74g00240.1 | MYB family protein | |
Zosma77g00500.1 | MYB family protein | |
Zosma79g00230.1 | MYB family protein | |
Zosma7g00970.1 | MYB family protein | |
Zosma80g00270.1 | MYB family protein | |
Zosma85g01140.1 | MYB family protein | |
Zosma88g00640.1 | MYB family protein | |
Zosma89g00340.1 | MYB family protein | |
Zosma8g01190.1 | MYB family protein | |
Zosma91g00550.1 | MYB family protein | |
Zosma91g00600.1 | MYB family protein | |
Zosma99g00690.1 | MYB family protein |
MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the "oncogene" v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as "MYB1R factors", with two as "R2R3-type MYB" factors, and with three repeats as "MYB3R" factors.
Stracke R, Werber M, Weisshaar B.
The R2R3-MYB gene family in Arabidopsis thaliana.
Curr Opin Plant Biol. 2001 Oct;4(5):447-56. Review.
PMID: 11597504