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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Utricularia gibba (116) | 678295669 | MYB family protein |
678296432 | MYB family protein | |
678297159 | MYB family protein | |
678298603 | MYB family protein | |
678299724 | MYB family protein | |
678300695 | MYB family protein | |
678300923 | MYB family protein | |
678301114 | MYB family protein | |
678301307 | MYB family protein | |
678304976 | MYB family protein | |
678305200 | MYB family protein | |
678307681 | MYB family protein | |
678312885 | MYB family protein | |
678313631 | MYB family protein | |
678315709 | MYB family protein | |
678315764 | MYB family protein | |
678316722 | MYB family protein | |
678317746 | MYB family protein | |
678321123 | MYB family protein | |
678321326 | MYB family protein | |
678324252 | MYB family protein | |
678327318 | MYB family protein | |
678327373 | MYB family protein | |
678329147 | MYB family protein | |
678331432 | MYB family protein | |
678331955 | MYB family protein | |
678334876 | MYB family protein | |
678336148 | MYB family protein | |
678336538 | MYB family protein | |
678336970 | MYB family protein | |
678337749 | MYB family protein | |
678337891 | MYB family protein | |
678337903 | MYB family protein | |
678339127 | MYB family protein | |
678339284 | MYB family protein | |
678339703 | MYB family protein | |
678345068 | MYB family protein | |
678348103 | MYB family protein | |
678355752 | MYB family protein | |
678356827 | MYB family protein | |
678358105 | MYB family protein | |
678361782 | MYB family protein | |
678363322 | MYB family protein | |
678363783 | MYB family protein | |
678367738 | MYB family protein | |
678368072 | MYB family protein | |
678369948 | MYB family protein | |
678375688 | MYB family protein | |
678376974 | MYB family protein | |
678379444 | MYB family protein | |
678380439 | MYB family protein | |
678383513 | MYB family protein | |
678383691 | MYB family protein | |
678388702 | MYB family protein | |
678390607 | MYB family protein | |
678397301 | MYB family protein | |
678398875 | MYB family protein | |
678399847 | MYB family protein | |
678401920 | MYB family protein | |
678405601 | MYB family protein | |
678405623 | MYB family protein | |
678407105 | MYB family protein | |
678410015 | MYB family protein | |
678411429 | MYB family protein | |
678411720 | MYB family protein | |
678411747 | MYB family protein | |
678415853 | MYB family protein | |
678417114 | MYB family protein | |
678417860 | MYB family protein | |
678419089 | MYB family protein | |
678424937 | MYB family protein | |
678433294 | MYB family protein | |
678433818 | MYB family protein | |
678436573 | MYB family protein | |
678437184 | MYB family protein | |
678440286 | MYB family protein | |
678440910 | MYB family protein | |
678441243 | MYB family protein | |
678442268 | MYB family protein | |
678443163 | MYB family protein | |
678444251 | MYB family protein | |
678444301 | MYB family protein | |
678444830 | MYB family protein | |
678444962 | MYB family protein | |
678445608 | MYB family protein | |
678445811 | MYB family protein | |
678446394 | MYB family protein | |
678446426 | MYB family protein | |
678447825 | MYB family protein | |
678448833 | MYB family protein | |
678449161 | MYB family protein | |
678450531 | MYB family protein | |
678451555 | MYB family protein | |
678451868 | MYB family protein | |
678452444 | MYB family protein | |
678453278 | MYB family protein | |
678454312 | MYB family protein | |
678455291 | MYB family protein | |
678456448 | MYB family protein | |
678456464 | MYB family protein | |
678460284 | MYB family protein | |
678461517 | MYB family protein | |
678462075 | MYB family protein | |
678462370 | MYB family protein | |
678462996 | MYB family protein | |
678464061 | MYB family protein | |
678464679 | MYB family protein | |
678465551 | MYB family protein | |
678465687 | MYB family protein | |
678466585 | MYB family protein | |
678467245 | MYB family protein | |
678467655 | MYB family protein | |
678467906 | MYB family protein | |
678468249 | MYB family protein | |
678468358 | MYB family protein | |
678471355 | MYB family protein |
MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the "oncogene" v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as "MYB1R factors", with two as "R2R3-type MYB" factors, and with three repeats as "MYB3R" factors.
Stracke R, Werber M, Weisshaar B.
The R2R3-MYB gene family in Arabidopsis thaliana.
Curr Opin Plant Biol. 2001 Oct;4(5):447-56. Review.
PMID: 11597504