PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
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Sopim01g060490.0.1 | GATA family protein | |
Sopim01g090760.0.1 | GATA family protein | |
Sopim01g100220.0.1 | GATA family protein | |
Sopim01g106030.0.1 | GATA family protein | |
Sopim01g106040.0.1 | GATA family protein | |
Sopim01g110310.0.1 | GATA family protein | |
Sopim02g062380.0.1 | GATA family protein | |
Sopim02g062760.0.1 | GATA family protein | |
Sopim02g084590.0.1 | GATA family protein | |
Sopim02g085190.0.1 | GATA family protein | |
Sopim03g033660.0.1 | GATA family protein | |
Sopim03g120890.0.1 | GATA family protein | |
Sopim04g015360.0.1 | GATA family protein | |
Sopim04g076530.0.1 | GATA family protein | |
Sopim05g053500.0.1 | GATA family protein | |
Sopim05g054400.0.1 | GATA family protein | |
Sopim05g056120.0.1 | GATA family protein | |
Sopim06g060940.0.1 | GATA family protein | |
Sopim06g075140.0.1 | GATA family protein | |
Sopim07g038160.0.1 | GATA family protein | |
Sopim08g007190.0.1 | GATA family protein | |
Sopim08g066510.0.1 | GATA family protein | |
Sopim08g077960.0.1 | GATA family protein | |
Sopim09g075610.0.1 | GATA family protein | |
Sopim09g091250.0.1 | GATA family protein | |
Sopim10g018560.0.1 | GATA family protein | |
Sopim10g047640.0.1 | GATA family protein | |
Sopim11g069510.0.1 | GATA family protein | |
Sopim12g008830.0.1 | GATA family protein | |
Sopim12g099370.0.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008