PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
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Phvul.001G035600.1 | GATA family protein | |
Phvul.001G109500.1 | GATA family protein | |
Phvul.001G226500.1 | GATA family protein | |
Phvul.002G001500.1 | GATA family protein | |
Phvul.002G030800.1 | GATA family protein | |
Phvul.002G112000.1 | GATA family protein | |
Phvul.002G213800.1 | GATA family protein | |
Phvul.002G250800.1 | GATA family protein | |
Phvul.003G110400.1 | GATA family protein | |
Phvul.003G137100.1 | GATA family protein | |
Phvul.003G224500.1 | GATA family protein | |
Phvul.003G253900.1 | GATA family protein | |
Phvul.003G258900.1 | GATA family protein | |
Phvul.004G079200.1 | GATA family protein | |
Phvul.004G083100.1 | GATA family protein | |
Phvul.005G134400.1 | GATA family protein | |
Phvul.006G212400.1 | GATA family protein | |
Phvul.007G095300.1 | GATA family protein | |
Phvul.007G227300.1 | GATA family protein | |
Phvul.007G227300.2 | GATA family protein | |
Phvul.008G157600.1 | GATA family protein | |
Phvul.008G182900.1 | GATA family protein | |
Phvul.008G254600.1 | GATA family protein | |
Phvul.009G003800.1 | GATA family protein | |
Phvul.009G035300.1 | GATA family protein | |
Phvul.009G035400.1 | GATA family protein | |
Phvul.009G077500.1 | GATA family protein | |
Phvul.009G110400.1 | GATA family protein | |
Phvul.009G118600.1 | GATA family protein | |
Phvul.009G118600.2 | GATA family protein | |
Phvul.009G232700.1 | GATA family protein | |
Phvul.010G146300.1 | GATA family protein | |
Phvul.011G039600.1 | GATA family protein | |
Phvul.011G039600.2 | GATA family protein | |
Phvul.011G080200.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008