PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
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Picea abies (29) | MA_10427358g0010 | Trihelix family protein |
MA_10430713g0010 | Trihelix family protein | |
MA_10433499g0020 | Trihelix family protein | |
MA_10436704g0010 | Trihelix family protein | |
MA_10437259g0030 | Trihelix family protein | |
MA_113047g0010 | Trihelix family protein | |
MA_11552g0010 | Trihelix family protein | |
MA_122255g0010 | Trihelix family protein | |
MA_133946g0010 | Trihelix family protein | |
MA_16728g0010 | Trihelix family protein | |
MA_174370g0020 | Trihelix family protein | |
MA_18871g0020 | Trihelix family protein | |
MA_20603g0010 | Trihelix family protein | |
MA_3313g0010 | Trihelix family protein | |
MA_34924g0010 | Trihelix family protein | |
MA_47951g0010 | Trihelix family protein | |
MA_49315g0010 | Trihelix family protein | |
MA_4997g0010 | Trihelix family protein | |
MA_68801g0010 | Trihelix family protein | |
MA_68810g0010 | Trihelix family protein | |
MA_69787g0010 | Trihelix family protein | |
MA_7129732g0010 | Trihelix family protein | |
MA_74910g0010 | Trihelix family protein | |
MA_79519g0010 | Trihelix family protein | |
MA_79619g0010 | Trihelix family protein | |
MA_8215969g0010 | Trihelix family protein | |
MA_905082g0010 | Trihelix family protein | |
MA_934266g0010 | Trihelix family protein | |
MA_98243g0010 | Trihelix family protein |
GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes (Liu et al. 1999;Zhou 1999).
Fang Y, Xie K, Hou X, Hu H, Xiong L.
Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses.
Mol Genet Genomics, 2010. 283(2): p. 157-69.
PMID: 20039179