![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
Previous version:
v3.0
v4.0
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Oryza glaberrima (109) | ORGLA01G0016500.1 | MYB family protein |
ORGLA01G0023500.1 | MYB family protein | |
ORGLA01G0040700.1 | MYB family protein | |
ORGLA01G0055500.1 | MYB family protein | |
ORGLA01G0073200.1 | MYB family protein | |
ORGLA01G0099200.1 | MYB family protein | |
ORGLA01G0100400.1 | MYB family protein | |
ORGLA01G0104900.1 | MYB family protein | |
ORGLA01G0154000.1 | MYB family protein | |
ORGLA01G0193500.1 | MYB family protein | |
ORGLA01G0219900.1 | MYB family protein | |
ORGLA01G0227100.1 | MYB family protein | |
ORGLA01G0230000.1 | MYB family protein | |
ORGLA01G0234600.1 | MYB family protein | |
ORGLA01G0306500.1 | MYB family protein | |
ORGLA01G0312200.1 | MYB family protein | |
ORGLA01G0314400.1 | MYB family protein | |
ORGLA01G0315200.1 | MYB family protein | |
ORGLA01G0320500.1 | MYB family protein | |
ORGLA01G0328800.1 | MYB family protein | |
ORGLA01G0394700.1 | MYB family protein | |
ORGLA01G0396300.1 | MYB family protein | |
ORGLA02G0010000.1 | MYB family protein | |
ORGLA02G0061500.1 | MYB family protein | |
ORGLA02G0210000.1 | MYB family protein | |
ORGLA02G0213400.1 | MYB family protein | |
ORGLA02G0262900.1 | MYB family protein | |
ORGLA02G0269000.1 | MYB family protein | |
ORGLA02G0284500.1 | MYB family protein | |
ORGLA02G0304700.1 | MYB family protein | |
ORGLA02G0354200.1 | MYB family protein | |
ORGLA03G0030900.1 | MYB family protein | |
ORGLA03G0093500.1 | MYB family protein | |
ORGLA03G0133600.1 | MYB family protein | |
ORGLA03G0138900.1 | MYB family protein | |
ORGLA03G0145100.1 | MYB family protein | |
ORGLA03G0178400.1 | MYB family protein | |
ORGLA03G0181800.1 | MYB family protein | |
ORGLA03G0186000.1 | MYB family protein | |
ORGLA03G0196700.1 | MYB family protein | |
ORGLA03G0224700.1 | MYB family protein | |
ORGLA03G0327000.1 | MYB family protein | |
ORGLA03G0409400.1 | MYB family protein | |
ORGLA04G0069500.1 | MYB family protein | |
ORGLA04G0119800.1 | MYB family protein | |
ORGLA04G0126700.1 | MYB family protein | |
ORGLA04G0153500.1 | MYB family protein | |
ORGLA04G0158700.1 | MYB family protein | |
ORGLA04G0168700.1 | MYB family protein | |
ORGLA04G0169000.1 | MYB family protein | |
ORGLA04G0178400.1 | MYB family protein | |
ORGLA04G0201500.1 | MYB family protein | |
ORGLA04G0202400.1 | MYB family protein | |
ORGLA05G0022200.1 | MYB family protein | |
ORGLA05G0025500.1 | MYB family protein | |
ORGLA05G0109400.1 | MYB family protein | |
ORGLA05G0157600.1 | MYB family protein | |
ORGLA05G0157700.1 | MYB family protein | |
ORGLA05G0161500.1 | MYB family protein | |
ORGLA05G0166300.1 | MYB family protein | |
ORGLA05G0210500.1 | MYB family protein | |
ORGLA05G0216200.1 | MYB family protein | |
ORGLA06G0038500.1 | MYB family protein | |
ORGLA06G0059500.1 | MYB family protein | |
ORGLA06G0073000.1 | MYB family protein | |
ORGLA06G0093500.1 | MYB family protein | |
ORGLA06G0093600.1 | MYB family protein | |
ORGLA06G0168900.1 | MYB family protein | |
ORGLA06G0184100.1 | MYB family protein | |
ORGLA07G0021600.1 | MYB family protein | |
ORGLA07G0062800.1 | MYB family protein | |
ORGLA07G0073600.1 | MYB family protein | |
ORGLA07G0124200.1 | MYB family protein | |
ORGLA07G0148800.1 | MYB family protein | |
ORGLA07G0179200.1 | MYB family protein | |
ORGLA07G0180600.1 | MYB family protein | |
ORGLA07G0213800.1 | MYB family protein | |
ORGLA07G0264800.1 | MYB family protein | |
ORGLA08G0023900.1 | MYB family protein | |
ORGLA08G0066000.1 | MYB family protein | |
ORGLA08G0134400.1 | MYB family protein | |
ORGLA08G0137800.1 | MYB family protein | |
ORGLA08G0138700.1 | MYB family protein | |
ORGLA08G0145900.1 | MYB family protein | |
ORGLA08G0162300.1 | MYB family protein | |
ORGLA08G0216900.1 | MYB family protein | |
ORGLA08G0217800.1 | MYB family protein | |
ORGLA09G0002900.1 | MYB family protein | |
ORGLA09G0071400.1 | MYB family protein | |
ORGLA09G0083700.1 | MYB family protein | |
ORGLA09G0137500.1 | MYB family protein | |
ORGLA09G0141200.1 | MYB family protein | |
ORGLA09G0168800.1 | MYB family protein | |
ORGLA09G0181800.1 | MYB family protein | |
ORGLA10G0057400.1 | MYB family protein | |
ORGLA10G0151700.1 | MYB family protein | |
ORGLA11G0047500.1 | MYB family protein | |
ORGLA11G0056700.1 | MYB family protein | |
ORGLA11G0142700.1 | MYB family protein | |
ORGLA11G0187400.1 | MYB family protein | |
ORGLA12G0012300.1 | MYB family protein | |
ORGLA12G0042300.1 | MYB family protein | |
ORGLA12G0042500.1 | MYB family protein | |
ORGLA12G0066300.1 | MYB family protein | |
ORGLA12G0120900.1 | MYB family protein | |
ORGLA12G0140200.1 | MYB family protein | |
ORGLA12G0141600.1 | MYB family protein | |
ORGLA12G0144700.1 | MYB family protein | |
ORGLA12G0206100.1 | MYB family protein |
MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the "oncogene" v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as "MYB1R factors", with two as "R2R3-type MYB" factors, and with three repeats as "MYB3R" factors.
Stracke R, Werber M, Weisshaar B.
The R2R3-MYB gene family in Arabidopsis thaliana.
Curr Opin Plant Biol. 2001 Oct;4(5):447-56. Review.
PMID: 11597504