PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
---|---|---|
XP_009758127.1 | GATA family protein | |
XP_009758423.1 | GATA family protein | |
XP_009759907.1 | GATA family protein | |
XP_009759908.1 | GATA family protein | |
XP_009759909.1 | GATA family protein | |
XP_009759910.1 | GATA family protein | |
XP_009760739.1 | GATA family protein | |
XP_009760862.1 | GATA family protein | |
XP_009760863.1 | GATA family protein | |
XP_009761911.1 | GATA family protein | |
XP_009767386.1 | GATA family protein | |
XP_009767635.1 | GATA family protein | |
XP_009767636.1 | GATA family protein | |
XP_009768393.1 | GATA family protein | |
XP_009768461.1 | GATA family protein | |
XP_009770170.1 | GATA family protein | |
XP_009770305.1 | GATA family protein | |
XP_009770686.1 | GATA family protein | |
XP_009772103.1 | GATA family protein | |
XP_009774660.1 | GATA family protein | |
XP_009774753.1 | GATA family protein | |
XP_009776483.1 | GATA family protein | |
XP_009776485.1 | GATA family protein | |
XP_009776828.1 | GATA family protein | |
XP_009776947.1 | GATA family protein | |
XP_009788297.1 | GATA family protein | |
XP_009788710.1 | GATA family protein | |
XP_009789570.1 | GATA family protein | |
XP_009795635.1 | GATA family protein | |
XP_009795845.1 | GATA family protein | |
XP_009795846.1 | GATA family protein | |
XP_009796257.1 | GATA family protein | |
XP_009799222.1 | GATA family protein | |
XP_009800952.1 | GATA family protein | |
XP_009802378.1 | GATA family protein | |
XP_009802379.1 | GATA family protein | |
XP_009802570.1 | GATA family protein | |
XP_009802675.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008