PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
---|---|---|
Mimulus guttatus (36) | Migut.A00198.1.p | GATA family protein |
Migut.B00065.1.p | GATA family protein | |
Migut.B00182.1.p | GATA family protein | |
Migut.B00182.2.p | GATA family protein | |
Migut.B00543.1.p | GATA family protein | |
Migut.B00988.1.p | GATA family protein | |
Migut.B00988.2.p | GATA family protein | |
Migut.B01577.1.p | GATA family protein | |
Migut.D00108.1.p | GATA family protein | |
Migut.D02232.1.p | GATA family protein | |
Migut.D02232.2.p | GATA family protein | |
Migut.E00830.1.p | GATA family protein | |
Migut.E00830.2.p | GATA family protein | |
Migut.E00831.1.p | GATA family protein | |
Migut.E01532.1.p | GATA family protein | |
Migut.F01751.1.p | GATA family protein | |
Migut.F01751.2.p | GATA family protein | |
Migut.F01981.1.p | GATA family protein | |
Migut.F01981.2.p | GATA family protein | |
Migut.F01981.3.p | GATA family protein | |
Migut.F01981.4.p | GATA family protein | |
Migut.G00106.1.p | GATA family protein | |
Migut.G00615.1.p | GATA family protein | |
Migut.H02486.1.p | GATA family protein | |
Migut.I00908.1.p | GATA family protein | |
Migut.I01184.1.p | GATA family protein | |
Migut.I01184.2.p | GATA family protein | |
Migut.J00606.1.p | GATA family protein | |
Migut.L00033.1.p | GATA family protein | |
Migut.L00521.1.p | GATA family protein | |
Migut.L01490.1.p | GATA family protein | |
Migut.N00329.1.p | GATA family protein | |
Migut.N01100.1.p | GATA family protein | |
Migut.N01274.1.p | GATA family protein | |
Migut.N02591.1.p | GATA family protein | |
Migut.N02591.2.p | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008