PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Lus10000587 | GATA family protein | |
Lus10002412 | GATA family protein | |
Lus10006000 | GATA family protein | |
Lus10009227 | GATA family protein | |
Lus10010027 | GATA family protein | |
Lus10011008 | GATA family protein | |
Lus10011010 | GATA family protein | |
Lus10011430 | GATA family protein | |
Lus10011762 | GATA family protein | |
Lus10016092 | GATA family protein | |
Lus10016849 | GATA family protein | |
Lus10020684 | GATA family protein | |
Lus10021466 | GATA family protein | |
Lus10023684 | GATA family protein | |
Lus10025829 | GATA family protein | |
Lus10028166 | GATA family protein | |
Lus10028178 | GATA family protein | |
Lus10028301 | GATA family protein | |
Lus10029863 | GATA family protein | |
Lus10031096 | GATA family protein | |
Lus10031464 | GATA family protein | |
Lus10032839 | GATA family protein | |
Lus10036329 | GATA family protein | |
Lus10037398 | GATA family protein | |
Lus10037572 | GATA family protein | |
Lus10037721 | GATA family protein | |
Lus10037994 | GATA family protein | |
Lus10038150 | GATA family protein | |
Lus10038273 | GATA family protein | |
Lus10040404 | GATA family protein | |
Lus10040556 | GATA family protein | |
Lus10041313 | GATA family protein | |
Lus10041810 | GATA family protein | |
Lus10042504 | GATA family protein | |
Lus10042879 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008