PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
---|---|---|
Lotus japonicus (126) | Lj0g3v0020039.1 | MYB family protein |
Lj0g3v0068589.1 | MYB family protein | |
Lj0g3v0080089.1 | MYB family protein | |
Lj0g3v0080089.2 | MYB family protein | |
Lj0g3v0082879.1 | MYB family protein | |
Lj0g3v0085519.1 | MYB family protein | |
Lj0g3v0089699.1 | MYB family protein | |
Lj0g3v0094629.1 | MYB family protein | |
Lj0g3v0096579.1 | MYB family protein | |
Lj0g3v0115219.1 | MYB family protein | |
Lj0g3v0129839.1 | MYB family protein | |
Lj0g3v0141409.1 | MYB family protein | |
Lj0g3v0141409.2 | MYB family protein | |
Lj0g3v0160079.1 | MYB family protein | |
Lj0g3v0160319.1 | MYB family protein | |
Lj0g3v0165349.1 | MYB family protein | |
Lj0g3v0165839.1 | MYB family protein | |
Lj0g3v0188229.1 | MYB family protein | |
Lj0g3v0195029.1 | MYB family protein | |
Lj0g3v0212129.1 | MYB family protein | |
Lj0g3v0212129.2 | MYB family protein | |
Lj0g3v0214919.1 | MYB family protein | |
Lj0g3v0221649.1 | MYB family protein | |
Lj0g3v0221649.2 | MYB family protein | |
Lj0g3v0232579.1 | MYB family protein | |
Lj0g3v0236339.1 | MYB family protein | |
Lj0g3v0236669.1 | MYB family protein | |
Lj0g3v0236669.2 | MYB family protein | |
Lj0g3v0246909.1 | MYB family protein | |
Lj0g3v0260369.1 | MYB family protein | |
Lj0g3v0260369.2 | MYB family protein | |
Lj0g3v0260369.3 | MYB family protein | |
Lj0g3v0260369.4 | MYB family protein | |
Lj0g3v0276369.1 | MYB family protein | |
Lj0g3v0298849.1 | MYB family protein | |
Lj0g3v0300449.1 | MYB family protein | |
Lj0g3v0318769.1 | MYB family protein | |
Lj0g3v0322209.1 | MYB family protein | |
Lj0g3v0329239.1 | MYB family protein | |
Lj0g3v0334719.1 | MYB family protein | |
Lj0g3v0337739.1 | MYB family protein | |
Lj0g3v0349359.1 | MYB family protein | |
Lj0g3v0356659.1 | MYB family protein | |
Lj0g3v0358759.1 | MYB family protein | |
Lj1g3v0128860.1 | MYB family protein | |
Lj1g3v0130130.1 | MYB family protein | |
Lj1g3v0488960.1 | MYB family protein | |
Lj1g3v1255850.1 | MYB family protein | |
Lj1g3v1382070.1 | MYB family protein | |
Lj1g3v1781110.1 | MYB family protein | |
Lj1g3v2050890.1 | MYB family protein | |
Lj1g3v2979210.1 | MYB family protein | |
Lj1g3v2979260.1 | MYB family protein | |
Lj1g3v3342760.1 | MYB family protein | |
Lj1g3v3751720.1 | MYB family protein | |
Lj1g3v3992560.1 | MYB family protein | |
Lj1g3v4012910.1 | MYB family protein | |
Lj1g3v4139540.2 | MYB family protein | |
Lj1g3v4483810.1 | MYB family protein | |
Lj1g3v4593270.1 | MYB family protein | |
Lj1g3v4809890.1 | MYB family protein | |
Lj1g3v4830110.1 | MYB family protein | |
Lj1g3v4863050.1 | MYB family protein | |
Lj1g3v4999560.1 | MYB family protein | |
Lj2g3v0286940.1 | MYB family protein | |
Lj2g3v0320640.1 | MYB family protein | |
Lj2g3v0632800.1 | MYB family protein | |
Lj2g3v0906460.1 | MYB family protein | |
Lj2g3v0949390.1 | MYB family protein | |
Lj2g3v1068470.1 | MYB family protein | |
Lj2g3v1326410.1 | MYB family protein | |
Lj2g3v1326410.2 | MYB family protein | |
Lj2g3v1495100.1 | MYB family protein | |
Lj2g3v1890900.1 | MYB family protein | |
Lj2g3v1915610.1 | MYB family protein | |
Lj2g3v1983980.1 | MYB family protein | |
Lj2g3v2017430.3 | MYB family protein | |
Lj2g3v2051180.1 | MYB family protein | |
Lj2g3v2556910.1 | MYB family protein | |
Lj2g3v2573410.1 | MYB family protein | |
Lj2g3v2688010.1 | MYB family protein | |
Lj2g3v2771150.1 | MYB family protein | |
Lj3g3v0323350.1 | MYB family protein | |
Lj3g3v0681710.1 | MYB family protein | |
Lj3g3v0839400.1 | MYB family protein | |
Lj3g3v0948220.1 | MYB family protein | |
Lj3g3v0962150.1 | MYB family protein | |
Lj3g3v1631860.1 | MYB family protein | |
Lj3g3v1631870.1 | MYB family protein | |
Lj3g3v1631870.2 | MYB family protein | |
Lj3g3v1855350.1 | MYB family protein | |
Lj3g3v2477670.1 | MYB family protein | |
Lj3g3v2745060.1 | MYB family protein | |
Lj3g3v2746150.1 | MYB family protein | |
Lj3g3v2886960.1 | MYB family protein | |
Lj3g3v2887010.1 | MYB family protein | |
Lj3g3v2887030.2 | MYB family protein | |
Lj3g3v3465520.1 | MYB family protein | |
Lj3g3v3639490.1 | MYB family protein | |
Lj4g3v0216670.1 | MYB family protein | |
Lj4g3v0805590.1 | MYB family protein | |
Lj4g3v1223860.1 | MYB family protein | |
Lj4g3v1317380.1 | MYB family protein | |
Lj4g3v1440760.1 | MYB family protein | |
Lj4g3v1787120.1 | MYB family protein | |
Lj4g3v2079370.1 | MYB family protein | |
Lj4g3v2282940.1 | MYB family protein | |
Lj4g3v2691870.1 | MYB family protein | |
Lj4g3v2859520.1 | MYB family protein | |
Lj4g3v2989050.1 | MYB family protein | |
Lj5g3v0065670.1 | MYB family protein | |
Lj5g3v0296120.1 | MYB family protein | |
Lj5g3v1533360.1 | MYB family protein | |
Lj5g3v1562120.1 | MYB family protein | |
Lj5g3v1601810.1 | MYB family protein | |
Lj5g3v1839400.1 | MYB family protein | |
Lj5g3v1839400.2 | MYB family protein | |
Lj5g3v2013880.1 | MYB family protein | |
Lj6g3v0029920.1 | MYB family protein | |
Lj6g3v0412680.1 | MYB family protein | |
Lj6g3v0607190.1 | MYB family protein | |
Lj6g3v0869180.1 | MYB family protein | |
Lj6g3v1201220.1 | MYB family protein | |
Lj6g3v1201340.3 | MYB family protein | |
Lj6g3v2095710.1 | MYB family protein | |
Lj6g3v2274820.1 | MYB family protein |
MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the "oncogene" v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as "MYB1R factors", with two as "R2R3-type MYB" factors, and with three repeats as "MYB3R" factors.
Stracke R, Werber M, Weisshaar B.
The R2R3-MYB gene family in Arabidopsis thaliana.
Curr Opin Plant Biol. 2001 Oct;4(5):447-56. Review.
PMID: 11597504