PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Juglans regia
B3 Family
Species TF ID Description
WALNUT_00001840-RAB3 family protein
WALNUT_00002518-RAB3 family protein
WALNUT_00005006-RAB3 family protein
WALNUT_00005007-RAB3 family protein
WALNUT_00005755-RAB3 family protein
WALNUT_00007079-RAB3 family protein
WALNUT_00007081-RAB3 family protein
WALNUT_00008107-RAB3 family protein
WALNUT_00008109-RAB3 family protein
WALNUT_00009674-RAB3 family protein
WALNUT_00010079-RAB3 family protein
WALNUT_00011203-RAB3 family protein
WALNUT_00011204-RAB3 family protein
WALNUT_00012175-RAB3 family protein
WALNUT_00013091-RAB3 family protein
WALNUT_00013458-RAB3 family protein
WALNUT_00013867-RAB3 family protein
WALNUT_00015532-RAB3 family protein
WALNUT_00015545-RAB3 family protein
WALNUT_00018591-RAB3 family protein
WALNUT_00018762-RAB3 family protein
WALNUT_00023094-RAB3 family protein
WALNUT_00023232-RAB3 family protein
WALNUT_00024384-RAB3 family protein
WALNUT_00027247-RAB3 family protein
B3 Family Introduction

The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.

All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1). The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.

Swaminathan K, Peterson K, Jack T.
The plant B3 superfamily.
Trends Plant Sci, 2008. 13(12): p. 647-55.
PMID: 18986826

Note: In plantTFDB, B3 family includes LAV family, REM family, and RAV family (those do not contain AP2 domain).