PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
---|---|---|
Glycine soja (44) | KHN00670.1 | GATA family protein |
KHN00692.1 | GATA family protein | |
KHN00843.1 | GATA family protein | |
KHN02924.1 | GATA family protein | |
KHN03321.1 | GATA family protein | |
KHN03949.1 | GATA family protein | |
KHN05677.1 | GATA family protein | |
KHN06505.1 | GATA family protein | |
KHN06609.1 | GATA family protein | |
KHN07221.1 | GATA family protein | |
KHN08159.1 | GATA family protein | |
KHN08284.1 | GATA family protein | |
KHN08980.1 | GATA family protein | |
KHN08981.1 | GATA family protein | |
KHN09862.1 | GATA family protein | |
KHN10929.1 | GATA family protein | |
KHN11215.1 | GATA family protein | |
KHN17141.1 | GATA family protein | |
KHN17230.1 | GATA family protein | |
KHN17667.1 | GATA family protein | |
KHN20036.1 | GATA family protein | |
KHN21512.1 | GATA family protein | |
KHN24612.1 | GATA family protein | |
KHN25424.1 | GATA family protein | |
KHN26151.1 | GATA family protein | |
KHN28468.1 | GATA family protein | |
KHN29722.1 | GATA family protein | |
KHN32754.1 | GATA family protein | |
KHN33452.1 | GATA family protein | |
KHN34894.1 | GATA family protein | |
KHN35841.1 | GATA family protein | |
KHN36134.1 | GATA family protein | |
KHN36479.1 | GATA family protein | |
KHN37033.1 | GATA family protein | |
KHN38074.1 | GATA family protein | |
KHN38758.1 | GATA family protein | |
KHN39835.1 | GATA family protein | |
KHN39963.1 | GATA family protein | |
KHN41684.1 | GATA family protein | |
KHN41973.1 | GATA family protein | |
KHN42657.1 | GATA family protein | |
KHN46251.1 | GATA family protein | |
KHN46789.1 | GATA family protein | |
KHN48447.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008