PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
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Gorai.001G213700.1 | FAR1 family protein | |
Gorai.001G227800.1 | FAR1 family protein | |
Gorai.001G227800.2 | FAR1 family protein | |
Gorai.001G227800.3 | FAR1 family protein | |
Gorai.002G163900.1 | FAR1 family protein | |
Gorai.003G096100.1 | FAR1 family protein | |
Gorai.003G096100.2 | FAR1 family protein | |
Gorai.003G140100.1 | FAR1 family protein | |
Gorai.003G140100.2 | FAR1 family protein | |
Gorai.004G152900.1 | FAR1 family protein | |
Gorai.004G227400.1 | FAR1 family protein | |
Gorai.004G227400.2 | FAR1 family protein | |
Gorai.004G227400.3 | FAR1 family protein | |
Gorai.004G227400.4 | FAR1 family protein | |
Gorai.004G227400.5 | FAR1 family protein | |
Gorai.004G227400.6 | FAR1 family protein | |
Gorai.004G227400.7 | FAR1 family protein | |
Gorai.005G016700.1 | FAR1 family protein | |
Gorai.005G016700.2 | FAR1 family protein | |
Gorai.005G016700.3 | FAR1 family protein | |
Gorai.005G016700.4 | FAR1 family protein | |
Gorai.005G126700.1 | FAR1 family protein | |
Gorai.005G128700.1 | FAR1 family protein | |
Gorai.005G128700.2 | FAR1 family protein | |
Gorai.005G129200.1 | FAR1 family protein | |
Gorai.005G129200.2 | FAR1 family protein | |
Gorai.005G129200.3 | FAR1 family protein | |
Gorai.005G129200.4 | FAR1 family protein | |
Gorai.005G129200.5 | FAR1 family protein | |
Gorai.005G134200.1 | FAR1 family protein | |
Gorai.005G134200.10 | FAR1 family protein | |
Gorai.005G134200.11 | FAR1 family protein | |
Gorai.005G134200.2 | FAR1 family protein | |
Gorai.005G134200.3 | FAR1 family protein | |
Gorai.005G134200.4 | FAR1 family protein | |
Gorai.005G134200.5 | FAR1 family protein | |
Gorai.005G134200.6 | FAR1 family protein | |
Gorai.005G134200.7 | FAR1 family protein | |
Gorai.005G134200.8 | FAR1 family protein | |
Gorai.005G134200.9 | FAR1 family protein | |
Gorai.006G037100.1 | FAR1 family protein | |
Gorai.006G047000.1 | FAR1 family protein | |
Gorai.006G047000.2 | FAR1 family protein | |
Gorai.006G101600.1 | FAR1 family protein | |
Gorai.006G101600.2 | FAR1 family protein | |
Gorai.006G118900.1 | FAR1 family protein | |
Gorai.006G118900.2 | FAR1 family protein | |
Gorai.006G118900.3 | FAR1 family protein | |
Gorai.006G118900.4 | FAR1 family protein | |
Gorai.006G255400.1 | FAR1 family protein | |
Gorai.006G255400.2 | FAR1 family protein | |
Gorai.007G053200.1 | FAR1 family protein | |
Gorai.007G081700.1 | FAR1 family protein | |
Gorai.007G173400.1 | FAR1 family protein | |
Gorai.007G173400.2 | FAR1 family protein | |
Gorai.007G173400.3 | FAR1 family protein | |
Gorai.008G062800.1 | FAR1 family protein | |
Gorai.009G072000.1 | FAR1 family protein | |
Gorai.009G072000.2 | FAR1 family protein | |
Gorai.009G072000.3 | FAR1 family protein | |
Gorai.009G072000.4 | FAR1 family protein | |
Gorai.009G127000.1 | FAR1 family protein | |
Gorai.009G127000.2 | FAR1 family protein | |
Gorai.009G127000.3 | FAR1 family protein | |
Gorai.010G116000.1 | FAR1 family protein | |
Gorai.010G189600.1 | FAR1 family protein | |
Gorai.011G085000.1 | FAR1 family protein | |
Gorai.011G141900.1 | FAR1 family protein | |
Gorai.011G142000.1 | FAR1 family protein | |
Gorai.011G142000.2 | FAR1 family protein | |
Gorai.011G142100.1 | FAR1 family protein | |
Gorai.011G142100.2 | FAR1 family protein | |
Gorai.011G142100.3 | FAR1 family protein | |
Gorai.011G195800.1 | FAR1 family protein | |
Gorai.011G195800.2 | FAR1 family protein | |
Gorai.011G195800.3 | FAR1 family protein | |
Gorai.011G195800.4 | FAR1 family protein | |
Gorai.011G195800.5 | FAR1 family protein | |
Gorai.011G195800.6 | FAR1 family protein | |
Gorai.011G224000.1 | FAR1 family protein | |
Gorai.012G021400.1 | FAR1 family protein | |
Gorai.012G021400.2 | FAR1 family protein | |
Gorai.012G021400.3 | FAR1 family protein | |
Gorai.012G021400.4 | FAR1 family protein | |
Gorai.013G065300.1 | FAR1 family protein | |
Gorai.N002500.1 | FAR1 family protein | |
Gorai.N002500.2 | FAR1 family protein | |
Gorai.N002500.3 | FAR1 family protein | |
Gorai.N002600.1 | FAR1 family protein | |
Gorai.N002600.2 | FAR1 family protein | |
Gorai.N002600.3 | FAR1 family protein | |
Gorai.N002600.4 | FAR1 family protein | |
Gorai.N002600.5 | FAR1 family protein |
We show that Arabidopsis FHY3 and FAR1, which encode two proteins related to Mutator-like transposases, act together to modulate phyA signaling by directly activating the transcription of FHY1 and FHL, whose products are essential for light-induced phyA nuclear accumulation and subsequent light responses. FHY3 and FAR1 have separable DNA binding and transcriptional activation domains that are highly conserved in Mutator-like transposases. Further, expression of FHY3 and FAR1 is negatively regulated by phyA signaling. We propose that FHY3 and FAR1 represent transcription factors that have been co-opted from an ancient Mutator-like transposase(s) to modulate phyA-signaling homeostasis in higher plants.
We next used a yeast one-hybrid assay to delineate the DNA sequences to which FHY3 and FAR1 bind. GAD-FHY3 or GAD-FAR1 fusion proteins (GAD, GAL4 transcriptional activation domain), but not GAD alone, activated the LacZ reporter genes driven by the FHY1 and FHL promoters. Deletion analysis narrowed down the FHY3/FAR1 binding site to a 39-bp promoter subfragment located on the "a" fragment for both FHY1 and FHL. Notably, these subfragments share a stretch of consensus sequence, 5'-TTCACGCGCC-3'. Mutating the core sequence "CACGCGC" of this motif (m2 and m3 for FHY1, m5 for FHL) abolished the reporter gene activation by both GAD-FHY3 and GAD-FAR1. Mutating the flanking sequences (m1 and m4) did not obviously affect the reporter gene activation by GAD-FAR1, but clearly reduced activation by GAD-FHY3. Thus, "CACGCGC" likely defines a cis-element that confers specific binding for FHY3 and FAR1 and is named FBS for FHY3-FAR1 binding site.
Lin R, Ding L, Casola C, Ripoll DR, Feschotte C, Wang H.
Transposase-derived transcription factors regulate light signaling in Arabidopsis.
Science, 2007. 318(5854): p. 1302-5.
PMID: 18033885