PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Gossypium arboreum
ARF Family
Species TF ID Description
Cotton_A_01955_BGI-A2_v1.0ARF family protein
Cotton_A_02933_BGI-A2_v1.0ARF family protein
Cotton_A_03644_BGI-A2_v1.0ARF family protein
Cotton_A_03933_BGI-A2_v1.0ARF family protein
Cotton_A_04263_BGI-A2_v1.0ARF family protein
Cotton_A_05677_BGI-A2_v1.0ARF family protein
Cotton_A_06071_BGI-A2_v1.0ARF family protein
Cotton_A_06107_BGI-A2_v1.0ARF family protein
Cotton_A_07064_BGI-A2_v1.0ARF family protein
Cotton_A_08273_BGI-A2_v1.0ARF family protein
Cotton_A_10518_BGI-A2_v1.0ARF family protein
Cotton_A_11048_BGI-A2_v1.0ARF family protein
Cotton_A_11311_BGI-A2_v1.0ARF family protein
Cotton_A_14407_BGI-A2_v1.0ARF family protein
Cotton_A_16138_BGI-A2_v1.0ARF family protein
Cotton_A_16408_BGI-A2_v1.0ARF family protein
Cotton_A_16760_BGI-A2_v1.0ARF family protein
Cotton_A_18446_BGI-A2_v1.0ARF family protein
Cotton_A_18937_BGI-A2_v1.0ARF family protein
Cotton_A_22543_BGI-A2_v1.0ARF family protein
Cotton_A_23397_BGI-A2_v1.0ARF family protein
Cotton_A_24047_BGI-A2_v1.0ARF family protein
Cotton_A_25871_BGI-A2_v1.0ARF family protein
Cotton_A_26156_BGI-A2_v1.0ARF family protein
Cotton_A_27669_BGI-A2_v1.0ARF family protein
Cotton_A_27843_BGI-A2_v1.0ARF family protein
Cotton_A_31049_BGI-A2_v1.0ARF family protein
Cotton_A_35443_BGI-A2_v1.0ARF family protein
Cotton_A_36154_BGI-A2_v1.0ARF family protein
Cotton_A_40208_BGI-A2_v1.0ARF family protein
ARF Family Introduction

Auxin response factors (ARF) are transcription factors that regulate the expression of auxin response genes. ARFs bind with specificity to TGTCTC auxin response elements (AuxRE) in promoters of these genes and function in combination with Aux/IAA (auxin/indole acetic acid) repressors, which dimerize with ARF activators in an auxin-regulated manner.

Most ARFs consist of an amino-terminal DNA-binding domain (DBD), a middle region that functions as an activation domain (AD) or repression domain (RD), and a carboxy-terminal dimerization domain (CTD). The ARF DBD is classified as a plant-specific B3-type, but requires additional amino-terminal and carboxy-terminal amino acids for efficient in vitro binding to TGTCTC AuxREs.

The ARF ADs and RDs are located just carboxy-terminal to the DBDs and contain biased amino acid sequences. ARF ADs are enriched in glutamine along with serine and leucine residues, while ARF RDs are enriched in serine, proline, leucine and glycine residues.

Guilfoyle TJ, Hagen G.
Auxin response factors.
Curr Opin Plant Biol, 2007. 10(5): p. 453-60.
PMID: 17900969