PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Fragaria vesca (31) | mrna01828.1-v1.0-hybrid | Trihelix family protein |
mrna02091.1-v1.0-hybrid | Trihelix family protein | |
mrna05318.1-v1.0-hybrid | Trihelix family protein | |
mrna05400.1-v1.0-hybrid | Trihelix family protein | |
mrna05956.1-v1.0-hybrid | Trihelix family protein | |
mrna06358.1-v1.0-hybrid | Trihelix family protein | |
mrna06360.1-v1.0-hybrid | Trihelix family protein | |
mrna06414.1-v1.0-hybrid | Trihelix family protein | |
mrna08029.1-v1.0-hybrid | Trihelix family protein | |
mrna08173.1-v1.0-hybrid | Trihelix family protein | |
mrna08175.1-v1.0-hybrid | Trihelix family protein | |
mrna08746.1-v1.0-hybrid | Trihelix family protein | |
mrna10772.1-v1.0-hybrid | Trihelix family protein | |
mrna10779.1-v1.0-hybrid | Trihelix family protein | |
mrna13363.1-v1.0-hybrid | Trihelix family protein | |
mrna13452.1-v1.0-hybrid | Trihelix family protein | |
mrna14244.1-v1.0-hybrid | Trihelix family protein | |
mrna15271.1-v1.0-hybrid | Trihelix family protein | |
mrna15385.1-v1.0-hybrid | Trihelix family protein | |
mrna16528.1-v1.0-hybrid | Trihelix family protein | |
mrna17613.1-v1.0-hybrid | Trihelix family protein | |
mrna18585.1-v1.0-hybrid | Trihelix family protein | |
mrna19838.1-v1.0-hybrid | Trihelix family protein | |
mrna20074.1-v1.0-hybrid | Trihelix family protein | |
mrna21007.1-v1.0-hybrid | Trihelix family protein | |
mrna23617.1-v1.0-hybrid | Trihelix family protein | |
mrna27722.1-v1.0-hybrid | Trihelix family protein | |
mrna29666.1-v1.0-hybrid | Trihelix family protein | |
mrna30099.1-v1.0-hybrid | Trihelix family protein | |
mrna30101.1-v1.0-hybrid | Trihelix family protein | |
mrna30156.1-v1.0-hybrid | Trihelix family protein |
GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes (Liu et al. 1999;Zhou 1999).
Fang Y, Xie K, Hou X, Hu H, Xiong L.
Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses.
Mol Genet Genomics, 2010. 283(2): p. 157-69.
PMID: 20039179