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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Eragrostis tef (128) | 462844628 | MYB family protein |
462847115 | MYB family protein | |
462851100 | MYB family protein | |
462851139 | MYB family protein | |
462851452 | MYB family protein | |
462851551 | MYB family protein | |
462852794 | MYB family protein | |
462853210 | MYB family protein | |
462854107 | MYB family protein | |
462854212 | MYB family protein | |
462856603 | MYB family protein | |
462857008 | MYB family protein | |
462857050 | MYB family protein | |
462857092 | MYB family protein | |
462860584 | MYB family protein | |
462861517 | MYB family protein | |
462862877 | MYB family protein | |
462864219 | MYB family protein | |
462864929 | MYB family protein | |
462864935 | MYB family protein | |
462865076 | MYB family protein | |
462866108 | MYB family protein | |
462867183 | MYB family protein | |
462867517 | MYB family protein | |
462868563 | MYB family protein | |
462869193 | MYB family protein | |
462869299 | MYB family protein | |
462869935 | MYB family protein | |
462873087 | MYB family protein | |
462873428 | MYB family protein | |
462873437 | MYB family protein | |
462874329 | MYB family protein | |
462875647 | MYB family protein | |
462875823 | MYB family protein | |
462876658 | MYB family protein | |
462877259 | MYB family protein | |
462878849 | MYB family protein | |
462880287 | MYB family protein | |
462880588 | MYB family protein | |
462881447 | MYB family protein | |
462882299 | MYB family protein | |
462883736 | MYB family protein | |
462884366 | MYB family protein | |
462885214 | MYB family protein | |
462886051 | MYB family protein | |
462886253 | MYB family protein | |
462886668 | MYB family protein | |
462886737 | MYB family protein | |
462887027 | MYB family protein | |
462889246 | MYB family protein | |
462889441 | MYB family protein | |
462891197 | MYB family protein | |
462893220 | MYB family protein | |
462893644 | MYB family protein | |
462898003 | MYB family protein | |
462898011 | MYB family protein | |
462900435 | MYB family protein | |
462900773 | MYB family protein | |
462900817 | MYB family protein | |
462901034 | MYB family protein | |
462902354 | MYB family protein | |
462902461 | MYB family protein | |
462902545 | MYB family protein | |
462904302 | MYB family protein | |
462904594 | MYB family protein | |
462904660 | MYB family protein | |
462906448 | MYB family protein | |
462908546 | MYB family protein | |
462909347 | MYB family protein | |
462909713 | MYB family protein | |
462909845 | MYB family protein | |
462911719 | MYB family protein | |
462912031 | MYB family protein | |
462912127 | MYB family protein | |
462916992 | MYB family protein | |
462917795 | MYB family protein | |
462918859 | MYB family protein | |
462919744 | MYB family protein | |
462919816 | MYB family protein | |
462919980 | MYB family protein | |
462920346 | MYB family protein | |
462920444 | MYB family protein | |
462920544 | MYB family protein | |
462920610 | MYB family protein | |
462920857 | MYB family protein | |
462920890 | MYB family protein | |
462921860 | MYB family protein | |
462923656 | MYB family protein | |
462925871 | MYB family protein | |
462927419 | MYB family protein | |
462929281 | MYB family protein | |
462929432 | MYB family protein | |
462930352 | MYB family protein | |
462930397 | MYB family protein | |
462930444 | MYB family protein | |
462932166 | MYB family protein | |
462932436 | MYB family protein | |
462933509 | MYB family protein | |
462934218 | MYB family protein | |
462935024 | MYB family protein | |
462935386 | MYB family protein | |
462936754 | MYB family protein | |
462937067 | MYB family protein | |
462937876 | MYB family protein | |
462940321 | MYB family protein | |
462941786 | MYB family protein | |
462942583 | MYB family protein | |
462943268 | MYB family protein | |
462945699 | MYB family protein | |
462946170 | MYB family protein | |
462948760 | MYB family protein | |
462952334 | MYB family protein | |
462952355 | MYB family protein | |
462952495 | MYB family protein | |
462953182 | MYB family protein | |
462954746 | MYB family protein | |
462956626 | MYB family protein | |
462958082 | MYB family protein | |
462958142 | MYB family protein | |
462959144 | MYB family protein | |
462959451 | MYB family protein | |
462960851 | MYB family protein | |
462963234 | MYB family protein | |
462964107 | MYB family protein | |
462964109 | MYB family protein | |
462967600 | MYB family protein | |
462968383 | MYB family protein | |
462968785 | MYB family protein |
MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the "oncogene" v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as "MYB1R factors", with two as "R2R3-type MYB" factors, and with three repeats as "MYB3R" factors.
Stracke R, Werber M, Weisshaar B.
The R2R3-MYB gene family in Arabidopsis thaliana.
Curr Opin Plant Biol. 2001 Oct;4(5):447-56. Review.
PMID: 11597504