PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Daucus carota (157) | DCAR_000385 | MYB family protein |
DCAR_000747 | MYB family protein | |
DCAR_000774 | MYB family protein | |
DCAR_000843 | MYB family protein | |
DCAR_001079 | MYB family protein | |
DCAR_001264 | MYB family protein | |
DCAR_002070 | MYB family protein | |
DCAR_002297 | MYB family protein | |
DCAR_002524 | MYB family protein | |
DCAR_002608 | MYB family protein | |
DCAR_002875 | MYB family protein | |
DCAR_003163 | MYB family protein | |
DCAR_003210 | MYB family protein | |
DCAR_003429 | MYB family protein | |
DCAR_003717 | MYB family protein | |
DCAR_004151 | MYB family protein | |
DCAR_004286 | MYB family protein | |
DCAR_004494 | MYB family protein | |
DCAR_004664 | MYB family protein | |
DCAR_004993 | MYB family protein | |
DCAR_005570 | MYB family protein | |
DCAR_005622 | MYB family protein | |
DCAR_005659 | MYB family protein | |
DCAR_005897 | MYB family protein | |
DCAR_006004 | MYB family protein | |
DCAR_006329 | MYB family protein | |
DCAR_006333 | MYB family protein | |
DCAR_006452 | MYB family protein | |
DCAR_006918 | MYB family protein | |
DCAR_007139 | MYB family protein | |
DCAR_007166 | MYB family protein | |
DCAR_007218 | MYB family protein | |
DCAR_007386 | MYB family protein | |
DCAR_008083 | MYB family protein | |
DCAR_008093 | MYB family protein | |
DCAR_008094 | MYB family protein | |
DCAR_008095 | MYB family protein | |
DCAR_008249 | MYB family protein | |
DCAR_008250 | MYB family protein | |
DCAR_008612 | MYB family protein | |
DCAR_008824 | MYB family protein | |
DCAR_008994 | MYB family protein | |
DCAR_009089 | MYB family protein | |
DCAR_009227 | MYB family protein | |
DCAR_009305 | MYB family protein | |
DCAR_009709 | MYB family protein | |
DCAR_009710 | MYB family protein | |
DCAR_009712 | MYB family protein | |
DCAR_010745 | MYB family protein | |
DCAR_010746 | MYB family protein | |
DCAR_010747 | MYB family protein | |
DCAR_010791 | MYB family protein | |
DCAR_010853 | MYB family protein | |
DCAR_011083 | MYB family protein | |
DCAR_011130 | MYB family protein | |
DCAR_011175 | MYB family protein | |
DCAR_011242 | MYB family protein | |
DCAR_011286 | MYB family protein | |
DCAR_011653 | MYB family protein | |
DCAR_011787 | MYB family protein | |
DCAR_012015 | MYB family protein | |
DCAR_012365 | MYB family protein | |
DCAR_012548 | MYB family protein | |
DCAR_012944 | MYB family protein | |
DCAR_012971 | MYB family protein | |
DCAR_012980 | MYB family protein | |
DCAR_012981 | MYB family protein | |
DCAR_012982 | MYB family protein | |
DCAR_013101 | MYB family protein | |
DCAR_013494 | MYB family protein | |
DCAR_013728 | MYB family protein | |
DCAR_014007 | MYB family protein | |
DCAR_014172 | MYB family protein | |
DCAR_014214 | MYB family protein | |
DCAR_014406 | MYB family protein | |
DCAR_014707 | MYB family protein | |
DCAR_014851 | MYB family protein | |
DCAR_015002 | MYB family protein | |
DCAR_015075 | MYB family protein | |
DCAR_015450 | MYB family protein | |
DCAR_015602 | MYB family protein | |
DCAR_015806 | MYB family protein | |
DCAR_016147 | MYB family protein | |
DCAR_016451 | MYB family protein | |
DCAR_016459 | MYB family protein | |
DCAR_016482 | MYB family protein | |
DCAR_016551 | MYB family protein | |
DCAR_016554 | MYB family protein | |
DCAR_016759 | MYB family protein | |
DCAR_017600 | MYB family protein | |
DCAR_017860 | MYB family protein | |
DCAR_017965 | MYB family protein | |
DCAR_018194 | MYB family protein | |
DCAR_018196 | MYB family protein | |
DCAR_018481 | MYB family protein | |
DCAR_018562 | MYB family protein | |
DCAR_018563 | MYB family protein | |
DCAR_018724 | MYB family protein | |
DCAR_018882 | MYB family protein | |
DCAR_019110 | MYB family protein | |
DCAR_019111 | MYB family protein | |
DCAR_019112 | MYB family protein | |
DCAR_019123 | MYB family protein | |
DCAR_019270 | MYB family protein | |
DCAR_019472 | MYB family protein | |
DCAR_020638 | MYB family protein | |
DCAR_020645 | MYB family protein | |
DCAR_020809 | MYB family protein | |
DCAR_020937 | MYB family protein | |
DCAR_021213 | MYB family protein | |
DCAR_021522 | MYB family protein | |
DCAR_021570 | MYB family protein | |
DCAR_021580 | MYB family protein | |
DCAR_021695 | MYB family protein | |
DCAR_021755 | MYB family protein | |
DCAR_021988 | MYB family protein | |
DCAR_022404 | MYB family protein | |
DCAR_023095 | MYB family protein | |
DCAR_023184 | MYB family protein | |
DCAR_023482 | MYB family protein | |
DCAR_023650 | MYB family protein | |
DCAR_024045 | MYB family protein | |
DCAR_024249 | MYB family protein | |
DCAR_024737 | MYB family protein | |
DCAR_025383 | MYB family protein | |
DCAR_025451 | MYB family protein | |
DCAR_025760 | MYB family protein | |
DCAR_025829 | MYB family protein | |
DCAR_026879 | MYB family protein | |
DCAR_026970 | MYB family protein | |
DCAR_026973 | MYB family protein | |
DCAR_027399 | MYB family protein | |
DCAR_027421 | MYB family protein | |
DCAR_027563 | MYB family protein | |
DCAR_028018 | MYB family protein | |
DCAR_028146 | MYB family protein | |
DCAR_028312 | MYB family protein | |
DCAR_028314 | MYB family protein | |
DCAR_028315 | MYB family protein | |
DCAR_028587 | MYB family protein | |
DCAR_028712 | MYB family protein | |
DCAR_028794 | MYB family protein | |
DCAR_029300 | MYB family protein | |
DCAR_029302 | MYB family protein | |
DCAR_029776 | MYB family protein | |
DCAR_030168 | MYB family protein | |
DCAR_030443 | MYB family protein | |
DCAR_030445 | MYB family protein | |
DCAR_030446 | MYB family protein | |
DCAR_030448 | MYB family protein | |
DCAR_030745 | MYB family protein | |
DCAR_030770 | MYB family protein | |
DCAR_031008 | MYB family protein | |
DCAR_031036 | MYB family protein | |
DCAR_031177 | MYB family protein | |
DCAR_031543 | MYB family protein | |
DCAR_032134 | MYB family protein |
MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the "oncogene" v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as "MYB1R factors", with two as "R2R3-type MYB" factors, and with three repeats as "MYB3R" factors.
Stracke R, Werber M, Weisshaar B.
The R2R3-MYB gene family in Arabidopsis thaliana.
Curr Opin Plant Biol. 2001 Oct;4(5):447-56. Review.
PMID: 11597504