PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Capsella rubella (34) | Carubv10000523m | Trihelix family protein |
Carubv10000532m | Trihelix family protein | |
Carubv10001432m | Trihelix family protein | |
Carubv10001830m | Trihelix family protein | |
Carubv10004844m | Trihelix family protein | |
Carubv10005240m | Trihelix family protein | |
Carubv10005348m | Trihelix family protein | |
Carubv10008638m | Trihelix family protein | |
Carubv10009151m | Trihelix family protein | |
Carubv10009153m | Trihelix family protein | |
Carubv10009310m | Trihelix family protein | |
Carubv10009313m | Trihelix family protein | |
Carubv10009582m | Trihelix family protein | |
Carubv10012336m | Trihelix family protein | |
Carubv10014110m | Trihelix family protein | |
Carubv10014242m | Trihelix family protein | |
Carubv10014421m | Trihelix family protein | |
Carubv10014453m | Trihelix family protein | |
Carubv10015256m | Trihelix family protein | |
Carubv10015321m | Trihelix family protein | |
Carubv10015798m | Trihelix family protein | |
Carubv10015883m | Trihelix family protein | |
Carubv10016104m | Trihelix family protein | |
Carubv10017413m | Trihelix family protein | |
Carubv10017646m | Trihelix family protein | |
Carubv10019255m | Trihelix family protein | |
Carubv10019974m | Trihelix family protein | |
Carubv10020016m | Trihelix family protein | |
Carubv10023521m | Trihelix family protein | |
Carubv10023675m | Trihelix family protein | |
Carubv10023684m | Trihelix family protein | |
Carubv10025047m | Trihelix family protein | |
Carubv10027519m | Trihelix family protein | |
Carubv10027995m | Trihelix family protein |
GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes (Liu et al. 1999;Zhou 1999).
Fang Y, Xie K, Hou X, Hu H, Xiong L.
Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses.
Mol Genet Genomics, 2010. 283(2): p. 157-69.
PMID: 20039179