PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Capsella rubella (157) | Carubv10000155m | MYB family protein |
Carubv10000399m | MYB family protein | |
Carubv10000643m | MYB family protein | |
Carubv10000715m | MYB family protein | |
Carubv10000924m | MYB family protein | |
Carubv10001224m | MYB family protein | |
Carubv10001308m | MYB family protein | |
Carubv10001328m | MYB family protein | |
Carubv10001366m | MYB family protein | |
Carubv10001376m | MYB family protein | |
Carubv10001378m | MYB family protein | |
Carubv10001433m | MYB family protein | |
Carubv10001525m | MYB family protein | |
Carubv10001565m | MYB family protein | |
Carubv10001573m | MYB family protein | |
Carubv10001695m | MYB family protein | |
Carubv10001741m | MYB family protein | |
Carubv10001816m | MYB family protein | |
Carubv10001860m | MYB family protein | |
Carubv10001990m | MYB family protein | |
Carubv10002477m | MYB family protein | |
Carubv10002556m | MYB family protein | |
Carubv10002573m | MYB family protein | |
Carubv10002949m | MYB family protein | |
Carubv10003148m | MYB family protein | |
Carubv10003172m | MYB family protein | |
Carubv10003231m | MYB family protein | |
Carubv10003283m | MYB family protein | |
Carubv10003623m | MYB family protein | |
Carubv10003695m | MYB family protein | |
Carubv10004063m | MYB family protein | |
Carubv10004386m | MYB family protein | |
Carubv10004873m | MYB family protein | |
Carubv10005426m | MYB family protein | |
Carubv10005438m | MYB family protein | |
Carubv10005483m | MYB family protein | |
Carubv10005698m | MYB family protein | |
Carubv10006284m | MYB family protein | |
Carubv10006404m | MYB family protein | |
Carubv10006405m | MYB family protein | |
Carubv10006597m | MYB family protein | |
Carubv10006684m | MYB family protein | |
Carubv10006727m | MYB family protein | |
Carubv10006734m | MYB family protein | |
Carubv10006761m | MYB family protein | |
Carubv10006783m | MYB family protein | |
Carubv10006843m | MYB family protein | |
Carubv10006864m | MYB family protein | |
Carubv10006921m | MYB family protein | |
Carubv10006990m | MYB family protein | |
Carubv10007254m | MYB family protein | |
Carubv10007255m | MYB family protein | |
Carubv10007337m | MYB family protein | |
Carubv10007482m | MYB family protein | |
Carubv10007638m | MYB family protein | |
Carubv10007732m | MYB family protein | |
Carubv10007747m | MYB family protein | |
Carubv10007810m | MYB family protein | |
Carubv10008427m | MYB family protein | |
Carubv10009497m | MYB family protein | |
Carubv10009563m | MYB family protein | |
Carubv10009761m | MYB family protein | |
Carubv10009808m | MYB family protein | |
Carubv10009957m | MYB family protein | |
Carubv10010045m | MYB family protein | |
Carubv10010086m | MYB family protein | |
Carubv10010143m | MYB family protein | |
Carubv10010865m | MYB family protein | |
Carubv10011014m | MYB family protein | |
Carubv10011190m | MYB family protein | |
Carubv10011707m | MYB family protein | |
Carubv10011887m | MYB family protein | |
Carubv10012451m | MYB family protein | |
Carubv10012515m | MYB family protein | |
Carubv10012605m | MYB family protein | |
Carubv10012991m | MYB family protein | |
Carubv10013308m | MYB family protein | |
Carubv10013309m | MYB family protein | |
Carubv10013377m | MYB family protein | |
Carubv10013393m | MYB family protein | |
Carubv10013882m | MYB family protein | |
Carubv10013887m | MYB family protein | |
Carubv10014093m | MYB family protein | |
Carubv10014195m | MYB family protein | |
Carubv10014367m | MYB family protein | |
Carubv10014371m | MYB family protein | |
Carubv10014411m | MYB family protein | |
Carubv10014443m | MYB family protein | |
Carubv10014503m | MYB family protein | |
Carubv10015099m | MYB family protein | |
Carubv10015750m | MYB family protein | |
Carubv10015767m | MYB family protein | |
Carubv10016245m | MYB family protein | |
Carubv10016289m | MYB family protein | |
Carubv10016434m | MYB family protein | |
Carubv10016562m | MYB family protein | |
Carubv10017119m | MYB family protein | |
Carubv10017397m | MYB family protein | |
Carubv10017612m | MYB family protein | |
Carubv10017640m | MYB family protein | |
Carubv10017650m | MYB family protein | |
Carubv10017875m | MYB family protein | |
Carubv10018382m | MYB family protein | |
Carubv10018530m | MYB family protein | |
Carubv10018592m | MYB family protein | |
Carubv10018693m | MYB family protein | |
Carubv10018700m | MYB family protein | |
Carubv10018748m | MYB family protein | |
Carubv10018791m | MYB family protein | |
Carubv10019103m | MYB family protein | |
Carubv10019345m | MYB family protein | |
Carubv10019409m | MYB family protein | |
Carubv10019440m | MYB family protein | |
Carubv10019483m | MYB family protein | |
Carubv10020618m | MYB family protein | |
Carubv10020691m | MYB family protein | |
Carubv10020714m | MYB family protein | |
Carubv10020723m | MYB family protein | |
Carubv10020753m | MYB family protein | |
Carubv10020766m | MYB family protein | |
Carubv10020856m | MYB family protein | |
Carubv10020888m | MYB family protein | |
Carubv10021327m | MYB family protein | |
Carubv10021411m | MYB family protein | |
Carubv10021434m | MYB family protein | |
Carubv10021858m | MYB family protein | |
Carubv10022245m | MYB family protein | |
Carubv10023414m | MYB family protein | |
Carubv10023470m | MYB family protein | |
Carubv10023471m | MYB family protein | |
Carubv10023692m | MYB family protein | |
Carubv10023736m | MYB family protein | |
Carubv10023744m | MYB family protein | |
Carubv10023831m | MYB family protein | |
Carubv10023905m | MYB family protein | |
Carubv10024801m | MYB family protein | |
Carubv10025227m | MYB family protein | |
Carubv10025403m | MYB family protein | |
Carubv10026070m | MYB family protein | |
Carubv10026666m | MYB family protein | |
Carubv10026694m | MYB family protein | |
Carubv10026749m | MYB family protein | |
Carubv10026801m | MYB family protein | |
Carubv10026822m | MYB family protein | |
Carubv10026871m | MYB family protein | |
Carubv10027524m | MYB family protein | |
Carubv10027541m | MYB family protein | |
Carubv10027619m | MYB family protein | |
Carubv10027655m | MYB family protein | |
Carubv10027659m | MYB family protein | |
Carubv10027693m | MYB family protein | |
Carubv10027861m | MYB family protein | |
Carubv10028160m | MYB family protein | |
Carubv10028436m | MYB family protein | |
Carubv10028458m | MYB family protein | |
Carubv10028573m | MYB family protein | |
Carubv10028642m | MYB family protein |
MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the "oncogene" v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as "MYB1R factors", with two as "R2R3-type MYB" factors, and with three repeats as "MYB3R" factors.
Stracke R, Werber M, Weisshaar B.
The R2R3-MYB gene family in Arabidopsis thaliana.
Curr Opin Plant Biol. 2001 Oct;4(5):447-56. Review.
PMID: 11597504