PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Cucumis melo (30) | MELO3C003466P1 | GATA family protein |
MELO3C006696P1 | GATA family protein | |
MELO3C006696P2 | GATA family protein | |
MELO3C007831P1 | GATA family protein | |
MELO3C007882P1 | GATA family protein | |
MELO3C011078P1 | GATA family protein | |
MELO3C011078P2 | GATA family protein | |
MELO3C011078P3 | GATA family protein | |
MELO3C011079P1 | GATA family protein | |
MELO3C011130P1 | GATA family protein | |
MELO3C012426P1 | GATA family protein | |
MELO3C012992P1 | GATA family protein | |
MELO3C013904P1 | GATA family protein | |
MELO3C013904P2 | GATA family protein | |
MELO3C014645P1 | GATA family protein | |
MELO3C015277P1 | GATA family protein | |
MELO3C015468P1 | GATA family protein | |
MELO3C015945P1 | GATA family protein | |
MELO3C016391P1 | GATA family protein | |
MELO3C016870P1 | GATA family protein | |
MELO3C018614P1 | GATA family protein | |
MELO3C019803P1 | GATA family protein | |
MELO3C021288P1 | GATA family protein | |
MELO3C021288P2 | GATA family protein | |
MELO3C023076P1 | GATA family protein | |
MELO3C023350P1 | GATA family protein | |
MELO3C024287P1 | GATA family protein | |
MELO3C024448P1 | GATA family protein | |
MELO3C026892P1 | GATA family protein | |
MELO3C027391P1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008