PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
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Citrullus lanatus (110) | Cla000320 | MYB family protein |
Cla000767 | MYB family protein | |
Cla000783 | MYB family protein | |
Cla001341 | MYB family protein | |
Cla001702 | MYB family protein | |
Cla003441 | MYB family protein | |
Cla003566 | MYB family protein | |
Cla004039 | MYB family protein | |
Cla004188 | MYB family protein | |
Cla004328 | MYB family protein | |
Cla004362 | MYB family protein | |
Cla004450 | MYB family protein | |
Cla005093 | MYB family protein | |
Cla005135 | MYB family protein | |
Cla005321 | MYB family protein | |
Cla005982 | MYB family protein | |
Cla006186 | MYB family protein | |
Cla006720 | MYB family protein | |
Cla006761 | MYB family protein | |
Cla007114 | MYB family protein | |
Cla007586 | MYB family protein | |
Cla007626 | MYB family protein | |
Cla007663 | MYB family protein | |
Cla007715 | MYB family protein | |
Cla007719 | MYB family protein | |
Cla007815 | MYB family protein | |
Cla007846 | MYB family protein | |
Cla008173 | MYB family protein | |
Cla008278 | MYB family protein | |
Cla008279 | MYB family protein | |
Cla008544 | MYB family protein | |
Cla008710 | MYB family protein | |
Cla009078 | MYB family protein | |
Cla009156 | MYB family protein | |
Cla009263 | MYB family protein | |
Cla009903 | MYB family protein | |
Cla010167 | MYB family protein | |
Cla010193 | MYB family protein | |
Cla010316 | MYB family protein | |
Cla010332 | MYB family protein | |
Cla010413 | MYB family protein | |
Cla010415 | MYB family protein | |
Cla010722 | MYB family protein | |
Cla011345 | MYB family protein | |
Cla011417 | MYB family protein | |
Cla011548 | MYB family protein | |
Cla011845 | MYB family protein | |
Cla012519 | MYB family protein | |
Cla012581 | MYB family protein | |
Cla012590 | MYB family protein | |
Cla013009 | MYB family protein | |
Cla013013 | MYB family protein | |
Cla013099 | MYB family protein | |
Cla013280 | MYB family protein | |
Cla013461 | MYB family protein | |
Cla013668 | MYB family protein | |
Cla013687 | MYB family protein | |
Cla013871 | MYB family protein | |
Cla013979 | MYB family protein | |
Cla014029 | MYB family protein | |
Cla014058 | MYB family protein | |
Cla014140 | MYB family protein | |
Cla014141 | MYB family protein | |
Cla015165 | MYB family protein | |
Cla015834 | MYB family protein | |
Cla016229 | MYB family protein | |
Cla016504 | MYB family protein | |
Cla016689 | MYB family protein | |
Cla016980 | MYB family protein | |
Cla017012 | MYB family protein | |
Cla017100 | MYB family protein | |
Cla017267 | MYB family protein | |
Cla017337 | MYB family protein | |
Cla017373 | MYB family protein | |
Cla017463 | MYB family protein | |
Cla017496 | MYB family protein | |
Cla017787 | MYB family protein | |
Cla017797 | MYB family protein | |
Cla017897 | MYB family protein | |
Cla017966 | MYB family protein | |
Cla018121 | MYB family protein | |
Cla018139 | MYB family protein | |
Cla018501 | MYB family protein | |
Cla018610 | MYB family protein | |
Cla018657 | MYB family protein | |
Cla018803 | MYB family protein | |
Cla018967 | MYB family protein | |
Cla018988 | MYB family protein | |
Cla019115 | MYB family protein | |
Cla019144 | MYB family protein | |
Cla019199 | MYB family protein | |
Cla019223 | MYB family protein | |
Cla019451 | MYB family protein | |
Cla019999 | MYB family protein | |
Cla020042 | MYB family protein | |
Cla020285 | MYB family protein | |
Cla020633 | MYB family protein | |
Cla020702 | MYB family protein | |
Cla020901 | MYB family protein | |
Cla021243 | MYB family protein | |
Cla021474 | MYB family protein | |
Cla021520 | MYB family protein | |
Cla021776 | MYB family protein | |
Cla021810 | MYB family protein | |
Cla022224 | MYB family protein | |
Cla022542 | MYB family protein | |
Cla022601 | MYB family protein | |
Cla022660 | MYB family protein | |
Cla022852 | MYB family protein | |
Cla023007 | MYB family protein |
MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the "oncogene" v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as "MYB1R factors", with two as "R2R3-type MYB" factors, and with three repeats as "MYB3R" factors.
Stracke R, Werber M, Weisshaar B.
The R2R3-MYB gene family in Arabidopsis thaliana.
Curr Opin Plant Biol. 2001 Oct;4(5):447-56. Review.
PMID: 11597504